RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 PDE8BO95263 885 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 PCCAP05165 728 aaPredicted RBP12.9□□□□□ -0.34
NXF1-211ENST00000531709 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
NXF1-211ENST00000531709 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 LRRN4CLQ8ND94 238 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 CWC15Q9P013 229 aaKnown RBP12.9□□□□□ -0.34
NXF1-211ENST00000531709 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
NXF1-211ENST00000531709 CTSWP56202 376 aa12.9□□□□□ -0.35
NXF1-211ENST00000531709 HLFQ16534 295 aa12.9□□□□□ -0.35
NXF1-211ENST00000531709 CCDC47Q96A33 483 aaKnown RBP12.9□□□□□ -0.35
NXF1-211ENST00000531709 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.35
NXF1-211ENST00000531709 AKAP12Q02952 1782 aa12.9□□□□□ -0.35
NXF1-211ENST00000531709 ERVV-2B6SEH9 535 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 OAS2P29728 719 aaKnown RBP12.89□□□□□ -0.35
NXF1-211ENST00000531709 BCAMP50895 628 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
NXF1-211ENST00000531709 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
NXF1-211ENST00000531709 CCDC70Q6NSX1 233 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 LPIN2Q92539 896 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 CSRNP2Q9H175 543 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 MAN1B1Q9UKM7 699 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 CTNND2Q9UQB3 1225 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 NEDD4P46934 1319 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 PNMA6AP0CW24 399 aaPredicted RBP12.89□□□□□ -0.35
NXF1-211ENST00000531709 CHMP4BP1P59074 171 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 VPS18Q9P253 973 aa12.89□□□□□ -0.35
NXF1-211ENST00000531709 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 KRT2P35908 639 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
NXF1-211ENST00000531709 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 EFCAB8A8MWE9 144 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 STIM1Q13586 685 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
NXF1-211ENST00000531709 TOGARAM2Q6ZUX3 1019 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 METTL16Q86W50 562 aaKnown RBP12.88□□□□□ -0.35
NXF1-211ENST00000531709 ZNF654Q8IZM8 581 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 FANCBQ8NB91 859 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 SOWAHDA6NJG2 315 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 TSPY2A6NKD2 308 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 PDE8AO60658 829 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 HSPA2P54652 639 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 TTLL11Q8NHH1 800 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 SYNRGQ9UMZ2 1314 aa12.88□□□□□ -0.35
NXF1-211ENST00000531709 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 GYS2P54840 703 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 CTAGE15A4D2H0 777 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 CTAGE8P0CG41 777 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 UBXN1Q04323 297 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 CTAGE6Q86UF2 777 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 CTAGE4Q8IX94 777 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 CTAGE1Q96RT6 745 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 DNA2P51530 1060 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 RESP18Q5W5W9 173 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 WDR24Q96S15 920 aa12.87□□□□□ -0.35
NXF1-211ENST00000531709 STX10O60499 249 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 CASP7P55210 303 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 GRIN1Q05586 938 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 PDE4BQ07343 736 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
NXF1-211ENST00000531709 SLF1Q9BQI6 1058 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 BPIFA3Q9BQP9 254 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 DEF6Q9H4E7 631 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
NXF1-211ENST00000531709 UBN2Q6ZU65 1347 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 EXOC5O00471 708 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 MTF1Q14872 753 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 UBA7P41226 1012 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
NXF1-211ENST00000531709 USP49Q70CQ1 688 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 MMP1P03956 469 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 CDC25AP30304 524 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 CASP14P31944 242 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.351e-14■■■■■ 51.7
NXF1-211ENST00000531709 CCDC152Q4G0S7 254 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
NXF1-211ENST00000531709 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms