RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
NPIPA3-202ENST00000531598 KCNG4Q8TDN1 519 aa11.25□□□□□ -0.61
NPIPA3-202ENST00000531598 SDR42E1Q8WUS8 393 aa11.25□□□□□ -0.61
NPIPA3-202ENST00000531598 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPIPA3-202ENST00000531598 GAKO14976 1311 aa11.25□□□□□ -0.61
NPIPA3-202ENST00000531598 CTAGE5O15320 804 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 YEATS4O95619 227 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 CAVIN2O95810 425 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 GNAQP50148 359 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 HDLBPQ00341 1268 aaKnown RBP11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 COL9A3Q14050 684 aaPredicted RBP11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 MFSD14BQ5SR56 506 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 MICU3Q86XE3 530 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 DGKHQ86XP1 1220 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 CCDC125Q86Z20 511 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 ZNF654Q8IZM8 581 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 ZNF384Q8TF68 577 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 ALG1Q9BT22 464 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 RNF26Q9BY78 433 aaPredicted RBP11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 NCOA5Q9HCD5 579 aaKnown RBP11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 MCM9Q9NXL9 1143 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 POLLQ9UGP5 575 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 RCOR1Q9UKL0 485 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 TNKSO95271 1327 aa11.24□□□□□ -0.61
NPIPA3-202ENST00000531598 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 RANBP6O60518 1105 aaKnown RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 FDPSP14324 419 aaKnown RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 GNL2Q13823 731 aaKnown RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 SEC23AQ15436 765 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 UVSSAQ2YD98 709 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 C12orf60Q5U649 245 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 FERMT3Q86UX7 667 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 C2CD5Q86YS7 1000 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 FANCBQ8NB91 859 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 LZTS2Q9BRK4 669 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 RTFDC1Q9BY42 306 aaPredicted RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 RTEL1Q9NZ71 1219 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 MKRN1Q9UHC7 482 aaKnown RBP11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 QSER1Q2KHR3 1735 aa11.23□□□□□ -0.61
NPIPA3-202ENST00000531598 TSPY2A6NKD2 308 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 NASPP49321 788 aaPredicted RBP11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 NTRK3Q16288 839 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 TTC6Q86TZ1 520 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 ZNF444Q8N0Y2 327 aaPredicted RBP11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 MYO3BQ8WXR4 1341 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
NPIPA3-202ENST00000531598 MYH13Q9UKX3 1938 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 A0A1W2PQ27 194 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 A0A1W2PQ64 194 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 A0A1W2PQD8 194 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 BMP15O95972 392 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 BTDP43251 543 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 FOXD4L6Q3SYB3 417 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 FOXD4L3Q6VB84 417 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 ZNF622Q969S3 477 aaKnown RBP eCLIP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 FOXP1Q9H334 677 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 GPHNQ9NQX3 736 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 SWAP70Q9UH65 585 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 MORC2Q9Y6X9 1032 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-202ENST00000531598 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.62
NPIPA3-202ENST00000531598 LTBP1Q14766 1721 aa11.21□□□□□ -0.62
NPIPA3-202ENST00000531598 PRPF3O43395 683 aaKnown RBP11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 GADD45BO75293 160 aaPredicted RBP11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 CCDC192P0DO97 292 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 U2AF2P26368 475 aaKnown RBP eCLIP11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 MMP14P50281 582 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 SF3A1Q15459 793 aaKnown RBP11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 STRIP1Q5VSL9 837 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 MYSM1Q5VVJ2 828 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 BICD2Q8TD16 824 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 NUP62CLQ9H1M0 184 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 KAT14Q9H8E8 782 aa11.2□□□□□ -0.62
NPIPA3-202ENST00000531598 SYCE3A1L190 88 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms