RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 GDNFP39905 211 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 CDKAL1Q5VV42 579 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 GGNQ86UU5 652 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 GPBAR1Q8TDU6 330 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 RELTQ969Z4 430 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 PBXIP1Q96AQ6 731 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 EPB41L4BQ9H329 900 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 DCP1AQ9NPI6 582 aaPredicted RBP3.42□□□□□ -1.86
RC3H1-206ENST00000531594 KRT82Q9NSB4 513 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 DNAJC25-GNG10A0A024R161 153 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 TMEM88BA6NKF7 163 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 WASH4PA8MWX3 477 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 DCDC2CA8MYV0 355 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 FOXD2O60548 495 aaPredicted RBP3.41□□□□□ -1.86
RC3H1-206ENST00000531594 FAM13AO94988 1023 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 ABL1P00519 1130 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 BMP7P18075 431 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 TRHRP34981 398 aaPredicted RBP3.41□□□□□ -1.86
RC3H1-206ENST00000531594 CLCN7P51798 805 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 ERVK-24P63145 666 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 PTPN12Q05209 780 aaKnown RBP3.41□□□□□ -1.86
RC3H1-206ENST00000531594 GRM2Q14416 872 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 RALGPS1Q5JS13 557 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 MAP1SQ66K74 1059 aaPredicted RBP3.41□□□□□ -1.86
RC3H1-206ENST00000531594 PRPF40BQ6NWY9 871 aaKnown RBP3.41□□□□□ -1.86
RC3H1-206ENST00000531594 PI16Q6UXB8 463 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 DNAJC25Q9H1X3 360 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 PARD6AQ9NPB6 346 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 GTF2IRD1Q9UHL9 959 aa3.41□□□□□ -1.86
RC3H1-206ENST00000531594 GNAT3A8MTJ3 354 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 SLITRK5O94991 958 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 GLDCP23378 1020 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 NFKB2Q00653 900 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 RPS26P11Q5JNZ5 115 aaPredicted RBP3.4□□□□□ -1.87
RC3H1-206ENST00000531594 C12orf40Q86WS4 652 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 SULF2Q8IWU5 870 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 GRIN3AQ8TCU5 1115 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 EPS8L3Q8TE67 593 aaKnown RBP3.4□□□□□ -1.87
RC3H1-206ENST00000531594 CCDC74AQ96AQ1 378 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 SLAMF8Q9P0V8 285 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 GPN3Q9UHW5 284 aaPredicted RBP3.4□□□□□ -1.87
RC3H1-206ENST00000531594 ST14Q9Y5Y6 855 aa3.4□□□□□ -1.87
RC3H1-206ENST00000531594 GADD45BO75293 160 aaPredicted RBP3.39□□□□□ -1.87
RC3H1-206ENST00000531594 FCGRTP55899 365 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 FGD1P98174 961 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 FKBP4Q02790 459 aaKnown RBP eCLIP3.39□□□□□ -1.87
RC3H1-206ENST00000531594 ZNF252P-AS1Q0IIN9 211 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 SKOR2Q2VWA4 1001 aaPredicted RBP3.39□□□□□ -1.87
RC3H1-206ENST00000531594 RASIP1Q5U651 963 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 ARMCX6Q7L4S7 300 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 RIN3Q8TB24 985 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 ABHD4Q8TB40 342 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 KCNN1Q92952 543 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 KCNC2Q96PR1 638 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 ALPK1Q96QP1 1244 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 ZCCHC4Q9H5U6 513 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 FBRSQ9HAH7 460 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 SP110Q9HB58 689 aa3.39□□□□□ -1.87
RC3H1-206ENST00000531594 PRDM5Q9NQX1 630 aaPredicted RBP3.39□□□□□ -1.87
RC3H1-206ENST00000531594 MYOCOSA0A1B0GUC4 107 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 EIF1AYO14602 144 aaKnown RBP3.38□□□□□ -1.87
RC3H1-206ENST00000531594 GPR182O15218 404 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 TRIM13O60858 407 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 CPNE3O75131 537 aaKnown RBP3.38□□□□□ -1.87
RC3H1-206ENST00000531594 IGHA2P01877 340 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 HK2P52789 917 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 RING1Q06587 406 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 TIGD5Q53EQ6 642 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 TTC6Q86TZ1 520 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 NPAS4Q8IUM7 802 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 MFSD4AQ8N468 514 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 FOXQ1Q9C009 403 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 MCOLN1Q9GZU1 580 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 RNF32Q9H0A6 362 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 C19orf44Q9H6X5 657 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 TMEM39AQ9NV64 488 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 CACNA2D2Q9NY47 1150 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 MAPK8IP1Q9UQF2 711 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 CAPN6Q9Y6Q1 641 aa3.38□□□□□ -1.87
RC3H1-206ENST00000531594 FAM155AB1AL88 458 aaPredicted RBP3.37□□□□□ -1.87
RC3H1-206ENST00000531594 PAGE1O75459 146 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 ARNTP27540 789 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 SF3B2Q13435 895 aaKnown RBP3.37□□□□□ -1.87
RC3H1-206ENST00000531594 NKG7Q16617 165 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 ZBTB37Q5TC79 503 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 DTHD1Q6ZMT9 781 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 UBE2FQ969M7 185 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 ACSBG1Q96GR2 724 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 CSRNP1Q96S65 589 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 FAM129BQ96TA1 746 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 SGPP1Q9BX95 441 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 GCM1Q9NP62 436 aa3.37□□□□□ -1.87
RC3H1-206ENST00000531594 ESR1P03372 595 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 GALK1P51570 392 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 DLG4P78352 724 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 ARHGAP4P98171 946 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 SSPNQ14714 243 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 MYLIPQ8WY64 445 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 SLC26A8Q96RN1 970 aa3.36□□□□□ -1.87
RC3H1-206ENST00000531594 MIPEPQ99797 713 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms