RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
SF3B2-212ENST00000531589 TGFBRAP1Q8WUH2 860 aa16.02■□□□□ 0.16
SF3B2-212ENST00000531589 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.16
SF3B2-212ENST00000531589 RCAN3Q9UKA8 241 aa16.02■□□□□ 0.16
SF3B2-212ENST00000531589 ADGRA2Q96PE1 1338 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 CYP2C8P10632 490 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 CYP7A1P22680 504 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 CAP2P40123 477 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-212ENST00000531589 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 SMCR8Q8TEV9 937 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-212ENST00000531589 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 ZNF333Q96JL9 665 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 ARHGAP39Q9C0H5 1083 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 AS3MTQ9HBK9 375 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 PIH1D3Q9NQM4 214 aaKnown RBP16.01■□□□□ 0.15
SF3B2-212ENST00000531589 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 PNMA3Q9UL41 463 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 COG6Q9Y2V7 657 aa16.01■□□□□ 0.15
SF3B2-212ENST00000531589 FAM196BA6NMK8 535 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 USP17L5A8MUK1 530 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 HLA-DOAP06340 250 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 SLURP2P0DP57 97 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 FCGRTP55899 365 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 PABPC4Q13310 644 aaKnown RBP eCLIP16■□□□□ 0.15
SF3B2-212ENST00000531589 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
SF3B2-212ENST00000531589 MAPKAPK5Q8IW41 473 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 PROCA1Q8NCQ7 364 aaPredicted RBP16■□□□□ 0.15
SF3B2-212ENST00000531589 GINM1Q9NU53 330 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 SRRDQ9UH36 339 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 AGTPBP1Q9UPW5 1226 aa16■□□□□ 0.15
SF3B2-212ENST00000531589 FLT1P17948 1338 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 POTEFA5A3E0 1075 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 ASNSP08243 561 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 IFIT2P09913 472 aaKnown RBP15.99■□□□□ 0.15
SF3B2-212ENST00000531589 BCRP11274 1271 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 SPP2Q13103 211 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 PRPF38BQ5VTL8 546 aaKnown RBP15.99■□□□□ 0.15
SF3B2-212ENST00000531589 ADGRA1Q86SQ6 560 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 MAGEB6Q8N7X4 407 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 TRIM47Q96LD4 638 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 MAST2Q6P0Q8 1798 aa15.99■□□□□ 0.15
SF3B2-212ENST00000531589 USP5P45974 858 aa15.98■□□□□ 0.15
SF3B2-212ENST00000531589 DOCK1Q14185 1865 aa15.98■□□□□ 0.15
SF3B2-212ENST00000531589 METTL16Q86W50 562 aaKnown RBP15.98■□□□□ 0.15
SF3B2-212ENST00000531589 RAET1EQ8TD07 263 aa15.98■□□□□ 0.15
SF3B2-212ENST00000531589 MYPNQ86TC9 1320 aa15.97■□□□□ 0.15
SF3B2-212ENST00000531589 ECM2O94769 699 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-212ENST00000531589 OSBPP22059 807 aa15.97■□□□□ 0.15
SF3B2-212ENST00000531589 DYNLL1P63167 89 aaKnown RBP15.97■□□□□ 0.15
SF3B2-212ENST00000531589 PDE3AQ14432 1141 aa15.97■□□□□ 0.15
SF3B2-212ENST00000531589 CCDC84Q86UT8 332 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-212ENST00000531589 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.97■□□□□ 0.15
SF3B2-212ENST00000531589 WDR18Q9BV38 432 aa15.97■□□□□ 0.15
SF3B2-212ENST00000531589 PALD1Q9ULE6 856 aa15.97■□□□□ 0.15
SF3B2-212ENST00000531589 APBB1O00213 710 aa15.96■□□□□ 0.15
SF3B2-212ENST00000531589 GCLCP48506 637 aaPredicted RBP15.96■□□□□ 0.15
SF3B2-212ENST00000531589 SH3D19Q5HYK7 790 aa15.96■□□□□ 0.15
SF3B2-212ENST00000531589 MIGA1Q8NAN2 632 aa15.96■□□□□ 0.15
SF3B2-212ENST00000531589 SH3TC2Q8TF17 1288 aa15.96■□□□□ 0.15
SF3B2-212ENST00000531589 ANTXR1Q9H6X2 564 aa15.96■□□□□ 0.15
SF3B2-212ENST00000531589 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.96■□□□□ 0.15
SF3B2-212ENST00000531589 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 TNPO2O14787 897 aaKnown RBP15.95■□□□□ 0.14
SF3B2-212ENST00000531589 EN2P19622 333 aaPredicted RBP15.95■□□□□ 0.14
SF3B2-212ENST00000531589 CTGFP29279 349 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 GRK4P32298 578 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 HMGCS2P54868 508 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 TTC6Q86TZ1 520 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 TMOD4Q9NZQ9 345 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
SF3B2-212ENST00000531589 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 PDE4DIPQ5VU43 2346 aa15.95■□□□□ 0.14
SF3B2-212ENST00000531589 BACE1P56817 501 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 UBXN2AP68543 259 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 RRP1BQ14684 758 aaKnown RBP15.94■□□□□ 0.14
SF3B2-212ENST00000531589 FAM110CQ1W6H9 321 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 TREML2Q5T2D2 321 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 SLC9C2Q5TAH2 1124 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 SIRT2Q8IXJ6 389 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 SLAIN1Q8ND83 568 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 COA7Q96BR5 231 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 EHD4Q9H223 541 aa15.94■□□□□ 0.14
SF3B2-212ENST00000531589 BIN2Q9UBW5 565 aaPredicted RBP15.94■□□□□ 0.14
SF3B2-212ENST00000531589 TNRC18O15417 2968 aaPredicted RBP15.93■□□□□ 0.14
SF3B2-212ENST00000531589 MAGEB6P1A0A0J9YX57 407 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 USP17L10C9JJH3 530 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 MYCP01106 439 aaPredicted RBP15.93■□□□□ 0.14
SF3B2-212ENST00000531589 PRKCZQ05513 592 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 ANKRD13CQ8N6S4 541 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 NKX2-3Q8TAU0 364 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 DNAJC2Q99543 621 aaKnown RBP15.93■□□□□ 0.14
SF3B2-212ENST00000531589 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 DNAJC18Q9H819 358 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 SERPINB13Q9UIV8 391 aa15.93■□□□□ 0.14
SF3B2-212ENST00000531589 RBBP6Q7Z6E9 1792 aaKnown RBP15.92■□□□□ 0.14
SF3B2-212ENST00000531589 PHIPQ8WWQ0 1821 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms