RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 C2orf69Q8N8R5 385 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 SUPT20HQ8NEM7 779 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 XAGE3Q8WTP9 111 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 VPS33BQ9H267 617 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 SAGE1Q9NXZ1 904 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 CHPF2Q9P2E5 772 aa9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 IBTKQ9P2D0 1353 aaPredicted RBP9.01□□□□□ -0.97
TRIM53CP-201ENST00000531490 RAD21O60216 631 aa9□□□□□ -0.97
TRIM53CP-201ENST00000531490 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
TRIM53CP-201ENST00000531490 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
TRIM53CP-201ENST00000531490 MOB2Q70IA6 237 aa9□□□□□ -0.97
TRIM53CP-201ENST00000531490 CTU1Q7Z7A3 348 aaKnown RBP9□□□□□ -0.97
TRIM53CP-201ENST00000531490 SCAF8Q9UPN6 1271 aaKnown RBP9□□□□□ -0.97
TRIM53CP-201ENST00000531490 CDHR2Q9BYE9 1310 aa9□□□□□ -0.97
TRIM53CP-201ENST00000531490 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 TBC1D8O95759 1140 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 CALD1Q05682 793 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 GRAPQ13588 217 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 SLFNL1Q499Z3 407 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 DDX46Q7L014 1031 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 GRAPLQ8TC17 118 aaPredicted RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 OSBPL3Q9H4L5 887 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 PHAXQ9H814 394 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 POLMQ9NP87 494 aaPredicted RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 RTL9Q8NET4 1388 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 HOXB7P09629 217 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 SOX11P35716 441 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 GPSM2P81274 684 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 SEMA3FQ13275 785 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 WDR63Q8IWG1 891 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 NPAS3Q8IXF0 933 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 ZNF296Q8WUU4 475 aaPredicted RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 DPF2Q92785 391 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 CELF1Q92879 486 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 DCPSQ96C86 337 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 CDCA5Q96FF9 252 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 GGA3Q9NZ52 723 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 DBF4Q9UBU7 674 aaPredicted RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 POLLQ9UGP5 575 aa8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 NSFL1CQ9UNZ2 370 aaKnown RBP8.99□□□□□ -0.97
TRIM53CP-201ENST00000531490 TRPM7Q96QT4 1865 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 TRAK2O60296 914 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 ECE2O60344 883 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 KIF4BQ2VIQ3 1234 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 PRAMEF18Q5VWM3 479 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 RNF135Q8IUD6 432 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 RNF217Q8TC41 542 aa8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 TRMT112Q9UI30 125 aaKnown RBP8.98□□□□□ -0.97
TRIM53CP-201ENST00000531490 DUOX1Q9NRD9 1551 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 IL16Q14005 1332 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 ZNF521Q96K83 1311 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 FANCIQ9NVI1 1328 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 UBE2Q2LH0YL09 131 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 H3BM21 787 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 VAMP4O75379 141 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 EXOSC9Q06265 439 aaKnown RBP8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 TCIRG1Q13488 830 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 TWISTNBQ3B726 338 aaPredicted RBP8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 ANGEL2Q5VTE6 544 aaKnown RBP8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 G2E3Q7L622 706 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 R3HDMLQ9H3Y0 253 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 HYPKQ9NX55 129 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 HDAC9Q9UKV0 1011 aa8.97□□□□□ -0.97
TRIM53CP-201ENST00000531490 SH3TC1Q8TE82 1336 aa8.96□□□□□ -0.98
TRIM53CP-201ENST00000531490 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
TRIM53CP-201ENST00000531490 CYP2U1Q7Z449 544 aa8.96□□□□□ -0.98
TRIM53CP-201ENST00000531490 PLBD2Q8NHP8 589 aa8.96□□□□□ -0.98
TRIM53CP-201ENST00000531490 ALG2Q9H553 416 aa8.96□□□□□ -0.98
TRIM53CP-201ENST00000531490 DOLKQ9UPQ8 538 aa8.96□□□□□ -0.98
TRIM53CP-201ENST00000531490 PTSQ03393 145 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 CCDC30Q5VVM6 783 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 TBC1D16Q8TBP0 767 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 CLUAP1Q96AJ1 413 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 FAM89AQ96GI7 184 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 TAF1P21675 1872 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 HTTP42858 3142 aa8.95□□□□□ -0.98
TRIM53CP-201ENST00000531490 COL4A1P02462 1669 aa8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 POM121CA8CG34 1229 aa8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 MEN1O00255 615 aa8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 PPFIA3O75145 1194 aa8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 MYCP01106 439 aaPredicted RBP8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 VIL1P09327 827 aaKnown RBP8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 RPS12P25398 132 aaKnown RBP8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 HABP4Q5JVS0 413 aaKnown RBP8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 ISCA1Q9BUE6 129 aa8.94□□□□□ -0.98
TRIM53CP-201ENST00000531490 PI4KAP2A4QPH2 592 aa8.93□□□□□ -0.98
TRIM53CP-201ENST00000531490 WTIPA6NIX2 430 aaPredicted RBP8.93□□□□□ -0.98
TRIM53CP-201ENST00000531490 GPR25O00155 361 aa8.93□□□□□ -0.98
TRIM53CP-201ENST00000531490 PIK3CDO00329 1044 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms