RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PATL2C9JE40 543 aaKnown RBP18.33■□□□□ 0.52
CCS-206ENST00000530961 FXR1P51114 621 aaKnown RBP eCLIP18.33■□□□□ 0.52
CCS-206ENST00000530961 MAP3K9P80192 1104 aa18.33■□□□□ 0.52
CCS-206ENST00000530961 NMIQ13287 307 aaPredicted RBP18.33■□□□□ 0.52
CCS-206ENST00000530961 MOB2Q70IA6 237 aa18.33■□□□□ 0.52
CCS-206ENST00000530961 METTL16Q86W50 562 aaKnown RBP18.33■□□□□ 0.52
CCS-206ENST00000530961 ANKRD13AQ8IZ07 590 aa18.33■□□□□ 0.52
CCS-206ENST00000530961 FAM227BQ96M60 508 aa18.33■□□□□ 0.52
CCS-206ENST00000530961 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.52
CCS-206ENST00000530961 SAP30BPQ9UHR5 308 aaKnown RBP18.33■□□□□ 0.52
CCS-206ENST00000530961 HERC5Q9UII4 1024 aaKnown RBP18.33■□□□□ 0.52
CCS-206ENST00000530961 TAOK2Q9UL54 1235 aa18.33■□□□□ 0.52
CCS-206ENST00000530961 POLR3DP05423 398 aaPredicted RBP18.32■□□□□ 0.52
CCS-206ENST00000530961 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
CCS-206ENST00000530961 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
CCS-206ENST00000530961 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
CCS-206ENST00000530961 AMOTL1Q8IY63 956 aa18.32■□□□□ 0.52
CCS-206ENST00000530961 NACAP1Q9BZK3 213 aa18.32■□□□□ 0.52
CCS-206ENST00000530961 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
CCS-206ENST00000530961 SSC5DA1L4H1 1573 aa18.31■□□□□ 0.52
CCS-206ENST00000530961 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
CCS-206ENST00000530961 GSG1L2A8MUP6 293 aa18.31■□□□□ 0.52
CCS-206ENST00000530961 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
CCS-206ENST00000530961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.31■□□□□ 0.523e-9■■■■■ 39
CCS-206ENST00000530961 CCDC102AQ96A19 550 aa18.31■□□□□ 0.52
CCS-206ENST00000530961 EHD4Q9H223 541 aa18.31■□□□□ 0.52
CCS-206ENST00000530961 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCS-206ENST00000530961 FZD1Q9UP38 647 aa18.31■□□□□ 0.52
CCS-206ENST00000530961 APPP05067 770 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 ZNF157P51786 506 aaPredicted RBP18.3■□□□□ 0.52
CCS-206ENST00000530961 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
CCS-206ENST00000530961 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 SLC10A4Q96EP9 437 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 WRNIP1Q96S55 665 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 TRIM34Q9BYJ4 488 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 SERPINB13Q9UIV8 391 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 CSADQ9Y600 493 aa18.3■□□□□ 0.52
CCS-206ENST00000530961 USP17L12C9JPN9 530 aa18.29■□□□□ 0.52
CCS-206ENST00000530961 USP17L21D6R901 530 aa18.29■□□□□ 0.52
CCS-206ENST00000530961 CHMLP26374 656 aa18.29■□□□□ 0.52
CCS-206ENST00000530961 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
CCS-206ENST00000530961 ARPP21Q9UBL0 812 aaPredicted RBP18.29■□□□□ 0.52
CCS-206ENST00000530961 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
CCS-206ENST00000530961 CCDC171Q6TFL3 1326 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 MAST2Q6P0Q8 1798 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 PHF20L1A8MW92 1017 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 CTNND1O60716 968 aaKnown RBP18.28■□□□□ 0.52
CCS-206ENST00000530961 PLCD1P51178 756 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 IFNL3Q8IZI9 196 aa18.28■□□□□ 0.52
CCS-206ENST00000530961 TDO2P48775 406 aa18.27■□□□□ 0.52
CCS-206ENST00000530961 VGLL4Q14135 290 aa18.27■□□□□ 0.52
CCS-206ENST00000530961 ALX1Q15699 326 aa18.27■□□□□ 0.52
CCS-206ENST00000530961 NOL9Q5SY16 702 aaKnown RBP18.27■□□□□ 0.52
CCS-206ENST00000530961 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
CCS-206ENST00000530961 NAPBQ9H115 298 aa18.27■□□□□ 0.52
CCS-206ENST00000530961 RAD50Q92878 1312 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 INPP5BP32019 993 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 GABPAQ06546 454 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 NOGQ13253 232 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 SLC4A8Q2Y0W8 1093 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 ZKSCAN4Q969J2 545 aaPredicted RBP18.26■□□□□ 0.51
CCS-206ENST00000530961 CLMNQ96JQ2 1002 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 EPB41L4AQ9HCS5 686 aaPredicted RBP18.26■□□□□ 0.51
CCS-206ENST00000530961 SWAP70Q9UH65 585 aa18.26■□□□□ 0.51
CCS-206ENST00000530961 SLC10A3P09131 477 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 HSPD1P10809 573 aaKnown RBP18.25■□□□□ 0.51
CCS-206ENST00000530961 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 TATDN1Q6P1N9 297 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 CTU1Q7Z7A3 348 aaKnown RBP18.25■□□□□ 0.51
CCS-206ENST00000530961 RASAL3Q86YV0 1011 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 SCYL3Q8IZE3 742 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 DNAJC18Q9H819 358 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 PICK1Q9NRD5 415 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 DOCK2Q92608 1830 aa18.25■□□□□ 0.51
CCS-206ENST00000530961 MYH2Q9UKX2 1941 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 FAM196BA6NMK8 535 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 FAM155AB1AL88 458 aaPredicted RBP18.24■□□□□ 0.51
CCS-206ENST00000530961 FOXP2O15409 715 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 CYP2D6P10635 497 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 CAP2P40123 477 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 CASC1Q6TDU7 716 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 ERO1BQ86YB8 467 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 ELP3Q9H9T3 547 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 CUL9Q8IWT3 2517 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
CCS-206ENST00000530961 SPDYE5A6NIY4 337 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 MINDY4BA8MYZ0 360 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 SGSM2O43147 1006 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 FGAP02671 866 aa18.23■□□□□ 0.51
CCS-206ENST00000530961 SLC3A2P08195 630 aaKnown RBP18.23■□□□□ 0.51
CCS-206ENST00000530961 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
CCS-206ENST00000530961 SPRYD7Q5W111 196 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms