RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 PALD1Q9ULE6 856 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 RPAP1Q9BWH6 1393 aaPredicted RBP6.64□□□□□ -1.35
PCF11-205ENST00000530906 MYH3P11055 1940 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 BRD1O95696 1058 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 CSF1RP07333 972 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 HMGB1P09429 215 aaKnown RBP6.63□□□□□ -1.35
PCF11-205ENST00000530906 PDCP20941 246 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 SSFA2P28290 1259 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 KCNJ4P48050 445 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 MAP3K10Q02779 954 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 TFCP2Q12800 502 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 CLN3Q13286 438 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 CCDC57Q2TAC2 916 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 GPAT2Q6NUI2 795 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 ATG9AQ7Z3C6 839 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 DOT1LQ8TEK3 1739 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 SMARCC1Q92922 1105 aaPredicted RBP6.63□□□□□ -1.35
PCF11-205ENST00000530906 ZNF512BQ96KM6 892 aaPredicted RBP6.63□□□□□ -1.35
PCF11-205ENST00000530906 CCDC8Q9H0W5 538 aaPredicted RBP6.63□□□□□ -1.35
PCF11-205ENST00000530906 SIL1Q9H173 461 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 HELLSQ9NRZ9 838 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 CEP126Q9P2H0 1117 aa6.63□□□□□ -1.35
PCF11-205ENST00000530906 DBNLQ9UJU6 430 aaKnown RBP6.63□□□□□ -1.35
PCF11-205ENST00000530906 LRP5O75197 1615 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 SLIT2O94813 1529 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 RTL9Q8NET4 1388 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 SPATA31A1Q5TZJ5 1347 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 SPATA31C2B4DYI2 1134 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 MAP4K4O95819 1239 aaPredicted RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 IGHA1P01876 353 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 CYP19A1P11511 503 aaPredicted RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 CASTP20810 708 aaKnown RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 NR1H3Q13133 447 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 NMIQ13287 307 aaPredicted RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 IFIT5Q13325 482 aaKnown RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 MCMDC2Q4G0Z9 681 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 PARP10Q53GL7 1025 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 CREB3L3Q68CJ9 461 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 RIPOR1Q6ZS17 1223 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 RUFY3Q7L099 469 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 DNAJC10Q8IXB1 793 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 SYAP1Q96A49 352 aaPredicted RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 DSCC1Q9BVC3 393 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 BOLA2Q9H3K6 86 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 PDRG1Q9NUG6 133 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 RBM8AQ9Y5S9 174 aaKnown RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 DDX49Q9Y6V7 483 aaKnown RBP6.62□□□□□ -1.35
PCF11-205ENST00000530906 NUP98P52948 1817 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 LAMB2P55268 1798 aa6.62□□□□□ -1.35
PCF11-205ENST00000530906 SPATA31A5Q5VU36 1347 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 SPATA31A7Q8IWB4 1347 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 SLC27A2O14975 620 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 TOM1O60784 492 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 TAF5LO75529 589 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 NCLP19338 710 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 AK2P54819 239 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 ZNF445P59923 1031 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 MCCD1P59942 119 aaPredicted RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 DDB1Q16531 1140 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 WDR44Q5JSH3 913 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 SLC27A3Q5K4L6 730 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 CCDC158Q5M9N0 1113 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 PRPF40BQ6NWY9 871 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 BLOC1S2Q6QNY1 142 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 CYP2U1Q7Z449 544 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 ZGPATQ8N5A5 531 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 TMEM87AQ8NBN3 555 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 GTPBP3Q969Y2 492 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 ACDQ96AP0 544 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 JAKMIP1Q96N16 626 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 NLRP3Q96P20 1036 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 UPF3BQ9BZI7 483 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 IL25Q9H293 177 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 ENAMQ9NRM1 1142 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 PAG1Q9NWQ8 432 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 TLR7Q9NYK1 1049 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 ASAP1Q9ULH1 1129 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 SMC3Q9UQE7 1217 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 KIF3AQ9Y496 699 aa6.61□□□□□ -1.35
PCF11-205ENST00000530906 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.61□□□□□ -1.35
PCF11-205ENST00000530906 CNTNAP5Q8WYK1 1306 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 ARAP2Q8WZ64 1704 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 A0A0D9SFI3 127 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 ANKRD18BA2A2Z9 1011 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 PDE8AO60658 829 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 RPS6KB1P23443 525 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
PCF11-205ENST00000530906 CTSWP56202 376 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 FOXK2Q01167 660 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 PTH1RQ03431 593 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 TTF1Q15361 905 aaPredicted RBP6.6□□□□□ -1.35
PCF11-205ENST00000530906 TAF7LQ5H9L4 462 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 ZMYM1Q5SVZ6 1142 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 ZSCAN25Q6NSZ9 544 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 FOXR1Q6PIV2 292 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 FBXL16Q8N461 479 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 RGS22Q8NE09 1264 aa6.6□□□□□ -1.35
PCF11-205ENST00000530906 KLHDC4Q8TBB5 520 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms