RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 KLRG1Q96E93 195 aa25.53■■□□□ 1.68
CAPN1-220ENST00000530567 HLA-DOAP06340 250 aa25.52■■□□□ 1.68
CAPN1-220ENST00000530567 TTC6Q86TZ1 520 aa25.52■■□□□ 1.68
CAPN1-220ENST00000530567 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.52■■□□□ 1.682e-9■□□□□ 10
CAPN1-220ENST00000530567 ZNF341Q9BYN7 854 aa25.52■■□□□ 1.68
CAPN1-220ENST00000530567 EHD4Q9H223 541 aa25.52■■□□□ 1.68
CAPN1-220ENST00000530567 ZNF112Q9UJU3 913 aa25.52■■□□□ 1.68
CAPN1-220ENST00000530567 ABT1Q9ULW3 272 aaKnown RBP25.52■■□□□ 1.68
CAPN1-220ENST00000530567 PHF20L1A8MW92 1017 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 CDC45O75419 566 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 APPP05067 770 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 POLR3DP05423 398 aaPredicted RBP25.51■■□□□ 1.67
CAPN1-220ENST00000530567 MFAP1P55081 439 aaKnown RBP25.51■■□□□ 1.67
CAPN1-220ENST00000530567 HUNKP57058 714 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 GABPAQ06546 454 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 SBK1Q52WX2 424 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 C12orf60Q5U649 245 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 RUFY2Q8WXA3 655 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 DDRGK1Q96HY6 314 aa25.51■■□□□ 1.67
CAPN1-220ENST00000530567 ARPP21Q9UBL0 812 aaPredicted RBP25.51■■□□□ 1.67
CAPN1-220ENST00000530567 HERC5Q9UII4 1024 aaKnown RBP25.51■■□□□ 1.67
CAPN1-220ENST00000530567 IREB2P48200 963 aaKnown RBP25.5■■□□□ 1.67
CAPN1-220ENST00000530567 TDO2P48775 406 aa25.5■■□□□ 1.67
CAPN1-220ENST00000530567 ALX1Q15699 326 aa25.5■■□□□ 1.67
CAPN1-220ENST00000530567 FOXP4Q8IVH2 680 aaPredicted RBP25.5■■□□□ 1.67
CAPN1-220ENST00000530567 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.49■■□□□ 1.67
CAPN1-220ENST00000530567 WRNIP1Q96S55 665 aa25.49■■□□□ 1.67
CAPN1-220ENST00000530567 ESYT1Q9BSJ8 1104 aa25.49■■□□□ 1.67
CAPN1-220ENST00000530567 NACAP1Q9BZK3 213 aa25.49■■□□□ 1.67
CAPN1-220ENST00000530567 NAPBQ9H115 298 aa25.49■■□□□ 1.67
CAPN1-220ENST00000530567 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.49■■□□□ 1.67
CAPN1-220ENST00000530567 SERPINB13Q9UIV8 391 aa25.49■■□□□ 1.67
CAPN1-220ENST00000530567 ZMYM6O95789 1325 aa25.48■■□□□ 1.67
CAPN1-220ENST00000530567 RASSF10A6NK89 507 aa25.48■■□□□ 1.67
CAPN1-220ENST00000530567 INPP5BP32019 993 aa25.48■■□□□ 1.67
CAPN1-220ENST00000530567 RRP1BQ14684 758 aaKnown RBP25.48■■□□□ 1.67
CAPN1-220ENST00000530567 ROBO3Q96MS0 1386 aa25.48■■□□□ 1.67
CAPN1-220ENST00000530567 MAP3K9P80192 1104 aa25.47■■□□□ 1.67
CAPN1-220ENST00000530567 HHIPL1Q96JK4 782 aa25.47■■□□□ 1.67
CAPN1-220ENST00000530567 CLMNQ96JQ2 1002 aa25.47■■□□□ 1.67
CAPN1-220ENST00000530567 DSCC1Q9BVC3 393 aa25.47■■□□□ 1.67
CAPN1-220ENST00000530567 FGAP02671 866 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 VGLL4Q14135 290 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 ANKRD13AQ8IZ07 590 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 CRACR2BQ8N4Y2 399 aaPredicted RBP25.46■■□□□ 1.67
CAPN1-220ENST00000530567 SLC44A5Q8NCS7 719 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 DYNLL2Q96FJ2 89 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 UNCXA6NJT0 531 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 SHMT1P34896 483 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 ZKSCAN4Q969J2 545 aaPredicted RBP25.46■■□□□ 1.67
CAPN1-220ENST00000530567 SNCAIPQ9Y6H5 919 aa25.46■■□□□ 1.67
CAPN1-220ENST00000530567 DOCK1Q14185 1865 aa25.45■■□□□ 1.66
CAPN1-220ENST00000530567 MINDY4BA8MYZ0 360 aa25.45■■□□□ 1.66
CAPN1-220ENST00000530567 PTH1RQ03431 593 aa25.45■■□□□ 1.66
CAPN1-220ENST00000530567 TATDN1Q6P1N9 297 aa25.45■■□□□ 1.66
CAPN1-220ENST00000530567 AMOTL1Q8IY63 956 aa25.45■■□□□ 1.66
CAPN1-220ENST00000530567 LAMA4Q16363 1823 aa25.44■■□□□ 1.66
CAPN1-220ENST00000530567 NOL9Q5SY16 702 aaKnown RBP25.44■■□□□ 1.66
CAPN1-220ENST00000530567 RGMBQ6NW40 437 aa25.44■■□□□ 1.66
CAPN1-220ENST00000530567 C16orf86Q6ZW13 317 aa25.44■■□□□ 1.66
CAPN1-220ENST00000530567 TAOK2Q9UL54 1235 aa25.44■■□□□ 1.66
CAPN1-220ENST00000530567 ATAD5Q96QE3 1844 aa25.43■■□□□ 1.66
CAPN1-220ENST00000530567 PPARAQ07869 468 aa25.43■■□□□ 1.66
CAPN1-220ENST00000530567 SHROOM1Q2M3G4 852 aaPredicted RBP25.43■■□□□ 1.66
CAPN1-220ENST00000530567 TRIM34Q9BYJ4 488 aa25.43■■□□□ 1.66
CAPN1-220ENST00000530567 JAG1P78504 1218 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 DEFB115Q30KQ5 88 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 CASC1Q6TDU7 716 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 RASAL3Q86YV0 1011 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 LSG1Q9H089 658 aaKnown RBP25.42■■□□□ 1.66
CAPN1-220ENST00000530567 SWAP70Q9UH65 585 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 ANAPC4Q9UJX5 808 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 CSADQ9Y600 493 aa25.42■■□□□ 1.66
CAPN1-220ENST00000530567 MYH8P13535 1937 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 CTNND1O60716 968 aaKnown RBP25.41■■□□□ 1.66
CAPN1-220ENST00000530567 CAP2P40123 477 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 CDK8P49336 464 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 CYP4F22Q6NT55 531 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 SCYL3Q8IZE3 742 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 NBPF3Q9H094 633 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 ELP3Q9H9T3 547 aa25.41■■□□□ 1.66
CAPN1-220ENST00000530567 FAM155AB1AL88 458 aaPredicted RBP25.4■■□□□ 1.66
CAPN1-220ENST00000530567 ZNF157P51786 506 aaPredicted RBP25.4■■□□□ 1.66
CAPN1-220ENST00000530567 CNKSR2Q8WXI2 1034 aa25.4■■□□□ 1.66
CAPN1-220ENST00000530567 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.4■■□□□ 1.66
CAPN1-220ENST00000530567 TACC3Q9Y6A5 838 aa25.4■■□□□ 1.66
CAPN1-220ENST00000530567 GDF11O95390 407 aa25.39■■□□□ 1.66
CAPN1-220ENST00000530567 SLC10A3P09131 477 aa25.39■■□□□ 1.66
CAPN1-220ENST00000530567 GJA5P36382 358 aa25.39■■□□□ 1.66
CAPN1-220ENST00000530567 SLC10A4Q96EP9 437 aa25.39■■□□□ 1.66
CAPN1-220ENST00000530567 PHIPQ8WWQ0 1821 aa25.38■■□□□ 1.65
CAPN1-220ENST00000530567 SPDYE5A6NIY4 337 aa25.38■■□□□ 1.65
CAPN1-220ENST00000530567 CTDSPL2Q05D32 466 aa25.38■■□□□ 1.65
CAPN1-220ENST00000530567 STK11IPQ8N1F8 1099 aa25.38■■□□□ 1.65
CAPN1-220ENST00000530567 MAP4K1Q92918 833 aa25.38■■□□□ 1.65
CAPN1-220ENST00000530567 THSD7BQ9C0I4 1608 aa25.38■■□□□ 1.65
CAPN1-220ENST00000530567 HAND2P61296 217 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 CERKLQ49MI3 558 aaPredicted RBP25.37■■□□□ 1.65
CAPN1-220ENST00000530567 WNK4Q96J92 1243 aa25.37■■□□□ 1.65
CAPN1-220ENST00000530567 CAPNS2Q96L46 248 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms