RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 IMPDH2P12268 514 aa9.34□□□□□ -0.91
CASP4-208ENST00000530309 GRK4P32298 578 aa9.34□□□□□ -0.91
CASP4-208ENST00000530309 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
CASP4-208ENST00000530309 WNT10AQ9GZT5 417 aa9.34□□□□□ -0.91
CASP4-208ENST00000530309 ZNRF3Q9ULT6 936 aa9.34□□□□□ -0.91
CASP4-208ENST00000530309 ACTL7BQ9Y614 415 aa9.34□□□□□ -0.91
CASP4-208ENST00000530309 KRBA1A5PL33 1030 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 PLCG1P19174 1290 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 ASPAP45381 313 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 PREPP48147 710 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 ETF1P62495 437 aaKnown RBP9.33□□□□□ -0.92
CASP4-208ENST00000530309 TTLL4Q14679 1199 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 UBXN4Q92575 508 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 ARMC5Q96C12 935 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 UBL7Q96S82 380 aaPredicted RBP9.33□□□□□ -0.92
CASP4-208ENST00000530309 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
CASP4-208ENST00000530309 GTF2F1P35269 517 aaKnown RBP eCLIP9.32□□□□□ -0.92
CASP4-208ENST00000530309 FBXW10Q5XX13 1052 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 CCDC81Q6ZN84 652 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
CASP4-208ENST00000530309 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 CRBNQ96SW2 442 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 PIDD1Q9HB75 910 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 ADAM30Q9UKF2 790 aa9.32□□□□□ -0.92
CASP4-208ENST00000530309 GAS2O43903 313 aaKnown RBP9.31□□□□□ -0.92
CASP4-208ENST00000530309 PGRP06401 933 aa9.31□□□□□ -0.92
CASP4-208ENST00000530309 NEFMP07197 916 aa9.31□□□□□ -0.92
CASP4-208ENST00000530309 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
CASP4-208ENST00000530309 NTF4P34130 210 aa9.31□□□□□ -0.92
CASP4-208ENST00000530309 MLECQ14165 292 aa9.31□□□□□ -0.92
CASP4-208ENST00000530309 TMEM201Q5SNT2 666 aa9.31□□□□□ -0.92
CASP4-208ENST00000530309 DZIP1LQ8IYY4 767 aaKnown RBP9.31□□□□□ -0.92
CASP4-208ENST00000530309 DHX38Q92620 1227 aaKnown RBP9.31□□□□□ -0.92
CASP4-208ENST00000530309 REV1Q9UBZ9 1251 aa9.31□□□□□ -0.92
CASP4-208ENST00000530309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.3□□□□□ -0.92
CASP4-208ENST00000530309 USP11P51784 963 aa9.3□□□□□ -0.92
CASP4-208ENST00000530309 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
CASP4-208ENST00000530309 UVSSAQ2YD98 709 aa9.3□□□□□ -0.92
CASP4-208ENST00000530309 LRRFIP1Q32MZ4 808 aaKnown RBP9.3□□□□□ -0.92
CASP4-208ENST00000530309 CDC37L1Q7L3B6 337 aa9.3□□□□□ -0.92
CASP4-208ENST00000530309 CD163Q86VB7 1156 aa9.3□□□□□ -0.92
CASP4-208ENST00000530309 SHDQ96IW2 340 aa9.3□□□□□ -0.92
CASP4-208ENST00000530309 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
CASP4-208ENST00000530309 CHRNA4P43681 627 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 GIPRP48546 466 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.29□□□□□ -0.92
CASP4-208ENST00000530309 HID1Q8IV36 788 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
CASP4-208ENST00000530309 KCT2Q8NC54 265 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 RBBP8NLQ8NC74 664 aaPredicted RBP9.29□□□□□ -0.92
CASP4-208ENST00000530309 ISL2Q96A47 359 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 ANAPC16Q96DE5 110 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 ACSS3Q9H6R3 686 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
CASP4-208ENST00000530309 C1QTNF9BB2RNN3 333 aa9.28□□□□□ -0.92
CASP4-208ENST00000530309 STK10O94804 968 aaKnown RBP9.28□□□□□ -0.92
CASP4-208ENST00000530309 ETFBP38117 255 aa9.28□□□□□ -0.92
CASP4-208ENST00000530309 RBL2Q08999 1139 aa9.28□□□□□ -0.92
CASP4-208ENST00000530309 OR6P1Q8NGX9 317 aa9.28□□□□□ -0.92
CASP4-208ENST00000530309 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
CASP4-208ENST00000530309 ZNF408Q9H9D4 720 aa9.28□□□□□ -0.92
CASP4-208ENST00000530309 GMIPQ9P107 970 aa9.28□□□□□ -0.92
CASP4-208ENST00000530309 MEIS3P2A8K0S8 358 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 RAB6AP20340 208 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 MCATQ8IVS2 390 aaKnown RBP9.27□□□□□ -0.93
CASP4-208ENST00000530309 UTP4Q969X6 686 aaKnown RBP9.27□□□□□ -0.93
CASP4-208ENST00000530309 MYRFLQ96LU7 910 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 YIPF2Q9BWQ6 316 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 ANTXR1Q9H6X2 564 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 FBRSQ9HAH7 460 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 SSU72Q9NP77 194 aaKnown RBP9.27□□□□□ -0.93
CASP4-208ENST00000530309 TJP2Q9UDY2 1190 aa9.27□□□□□ -0.93
CASP4-208ENST00000530309 SLC22A31A6NKX4 558 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 DNAJA2O60884 412 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 RASSF7Q02833 373 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 SLC6A19Q695T7 634 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.26□□□□□ -0.93
CASP4-208ENST00000530309 MRPL41Q8IXM3 137 aaKnown RBP9.26□□□□□ -0.93
CASP4-208ENST00000530309 ARMC10Q8N2F6 343 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 TMEM40Q8WWA1 233 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 TMEM87BQ96K49 555 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 HIRIP3Q9BW71 556 aaPredicted RBP9.26□□□□□ -0.93
CASP4-208ENST00000530309 PCOLCE2Q9UKZ9 415 aa9.26□□□□□ -0.93
CASP4-208ENST00000530309 BMP3P12645 472 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 CAP2P40123 477 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 YARSP54577 528 aaKnown RBP9.25□□□□□ -0.93
CASP4-208ENST00000530309 NKG7Q16617 165 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 SGO2Q562F6 1265 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 UBE3DQ7Z6J8 389 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 LSRQ86X29 649 aaPredicted RBP9.25□□□□□ -0.93
CASP4-208ENST00000530309 FBLIM1Q8WUP2 373 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
CASP4-208ENST00000530309 DNAJC2Q99543 621 aaKnown RBP9.25□□□□□ -0.93
CASP4-208ENST00000530309 SEMA6CQ9H3T2 930 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 PRKAG3Q9UGI9 489 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms