RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TPTE2Q6XPS3 522 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-206ENST00000530277 BAZ2BQ9UIF8 2168 aaKnown RBP14.05□□□□□ -0.16
SCN3B-206ENST00000530277 MROH1Q8NDA8 1641 aa14.05□□□□□ -0.16
SCN3B-206ENST00000530277 WDR17Q8IZU2 1322 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 DEXIO95424 95 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 YEATS4O95619 227 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 HIBADHP31937 336 aaKnown RBP14.04□□□□□ -0.16
SCN3B-206ENST00000530277 TFAP4Q01664 338 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 SENP2Q9HC62 589 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 NPHP4O75161 1426 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-206ENST00000530277 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 RILPL1Q5EBL4 403 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 CLEC17AQ6ZS10 378 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 ATG9AQ7Z3C6 839 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 RCOR1Q9UKL0 485 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 LDHBP07195 334 aaKnown RBP14.04□□□□□ -0.16
SCN3B-206ENST00000530277 LMAN1P49257 510 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 FOXO4P98177 505 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 CT47A1Q5JQC4 288 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-206ENST00000530277 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 NOSTRINQ8IVI9 506 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 TGFBRAP1Q8WUH2 860 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 CPVLQ9H3G5 476 aa14.04□□□□□ -0.16
SCN3B-206ENST00000530277 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
SCN3B-206ENST00000530277 EVCP57679 992 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 SPA17Q15506 151 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 AKR1B10O60218 316 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-206ENST00000530277 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 LOC102724428A0A0B4J2F2 783 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-206ENST00000530277 SIK1P57059 783 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 RABEP2Q9H5N1 569 aa14.03□□□□□ -0.16
SCN3B-206ENST00000530277 RTCBQ9Y3I0 505 aaKnown RBP14.03□□□□□ -0.16
SCN3B-206ENST00000530277 FOXN1O15353 648 aa14.02□□□□□ -0.16
SCN3B-206ENST00000530277 ADD2P35612 726 aa14.02□□□□□ -0.16
SCN3B-206ENST00000530277 RNASE9P60153 205 aaKnown RBP14.02□□□□□ -0.16
SCN3B-206ENST00000530277 KRT222Q8N1A0 295 aa14.02□□□□□ -0.16
SCN3B-206ENST00000530277 ZNF609O15014 1411 aa14.02□□□□□ -0.16
SCN3B-206ENST00000530277 CCDC40Q4G0X9 1142 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 TTC38Q5R3I4 469 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 TXKP42681 527 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 KANK3Q6NY19 840 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 DYMQ7RTS9 669 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 PCDHB6Q9Y5E3 794 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 SALL3Q9BXA9 1300 aa14.02□□□□□ -0.17
SCN3B-206ENST00000530277 MACROD2A1Z1Q3 448 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 ERLIN1O75477 346 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 CCDC175P0C221 793 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 GNAT2P19087 354 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 CDC27P30260 824 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 DTHD1Q6ZMT9 781 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 IQUBQ8NA54 791 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 EXOC1Q9NV70 894 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
SCN3B-206ENST00000530277 SRP68Q9UHB9 627 aaKnown RBP14.01□□□□□ -0.17
SCN3B-206ENST00000530277 KIF28PB7ZC32 967 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 NMT2O60551 498 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 CUTAO60888 179 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 PTPROQ16827 1216 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 DNAJC21Q5F1R6 531 aaKnown RBP14.01□□□□□ -0.17
SCN3B-206ENST00000530277 USPL1Q5W0Q7 1092 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 LEKR1Q6ZMV7 388 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
SCN3B-206ENST00000530277 EPSTI1Q96J88 318 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 SLF1Q9BQI6 1058 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 ATG3Q9NT62 314 aa14.01□□□□□ -0.17
SCN3B-206ENST00000530277 CCNL1Q9UK58 526 aaPredicted RBP14.01□□□□□ -0.17
SCN3B-206ENST00000530277 UFL1O94874 794 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
SCN3B-206ENST00000530277 CALML4Q96GE6 196 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 PPLO60437 1756 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 CCDC66A2RUB6 948 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 TCP10Q12799 353 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 TEX11Q8IYF3 940 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 CSRNP2Q9H175 543 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 ACBD3Q9H3P7 528 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 NCOA3Q9Y6Q9 1424 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 AP5Z1O43299 807 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 CMA1P23946 247 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 DIXDC1Q155Q3 683 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 SAMSN1Q9NSI8 373 aaKnown RBP14□□□□□ -0.17
SCN3B-206ENST00000530277 ZMYM6O95789 1325 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 NEDD4P46934 1319 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 ARHGEF28Q8N1W1 1705 aaKnown RBP14□□□□□ -0.17
SCN3B-206ENST00000530277 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 ADGRL3Q9HAR2 1447 aa14□□□□□ -0.17
SCN3B-206ENST00000530277 KCNQ2O43526 872 aa13.99□□□□□ -0.17
SCN3B-206ENST00000530277 BMS1Q14692 1282 aaKnown RBP13.99□□□□□ -0.17
SCN3B-206ENST00000530277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-206ENST00000530277 CCDC148Q8NFR7 591 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms