RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 NAALADL2Q58DX5 795 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 BCO2Q9BYV7 579 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 FAM8A1Q9UBU6 413 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 PKD1L3Q7Z443 1732 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 CPSF1Q10570 1443 aaKnown RBP9.81□□□□□ -0.84
SVIP-204ENST00000530199 ADGRB1O14514 1584 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 MMP20O60882 483 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 GADD45BO75293 160 aaPredicted RBP9.8□□□□□ -0.84
SVIP-204ENST00000530199 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
SVIP-204ENST00000530199 LAPTM4AQ15012 233 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 NXPE4Q6UWF7 544 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 ARHGAP27Q6ZUM4 889 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 NDFIP2Q9NV92 336 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 HCN2Q9UL51 889 aa9.8□□□□□ -0.84
SVIP-204ENST00000530199 USP31Q70CQ4 1352 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 BNIP3LO60238 219 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 TGFB2P61812 414 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 TRIM22Q8IYM9 498 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 SUV39H2Q9H5I1 410 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
SVIP-204ENST00000530199 ZFATQ9P243 1243 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 CCNL1Q9UK58 526 aaPredicted RBP9.79□□□□□ -0.84
SVIP-204ENST00000530199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.79□□□□□ -0.84
SVIP-204ENST00000530199 USP54Q70EL1 1684 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 KIAA1551Q9HCM1 1747 aa9.79□□□□□ -0.84
SVIP-204ENST00000530199 CNTNAP1P78357 1384 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 RARAP10276 462 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 GRM2Q14416 872 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 GRIN2CQ14957 1233 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 ARHGEF25Q86VW2 580 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 TGIF2Q9GZN2 237 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 MARK1Q9P0L2 795 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 KANSL3Q9P2N6 904 aa9.78□□□□□ -0.84
SVIP-204ENST00000530199 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.84
SVIP-204ENST00000530199 LOC105371045A0A1W2PR82 267 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 HSPA8P11142 646 aaKnown RBP9.77□□□□□ -0.85
SVIP-204ENST00000530199 EDN3P14138 238 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 IL2RBP14784 551 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 VEGFAP15692 232 aaPredicted RBP9.77□□□□□ -0.85
SVIP-204ENST00000530199 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.85
SVIP-204ENST00000530199 MEI1Q5TIA1 1274 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 SREK1Q8WXA9 508 aaKnown RBP9.77□□□□□ -0.85
SVIP-204ENST00000530199 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 PNMA5Q96PV4 448 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 EFCC1Q9HA90 598 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 SENP2Q9HC62 589 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 TRAK1Q9UPV9 953 aa9.77□□□□□ -0.85
SVIP-204ENST00000530199 NSD2O96028 1365 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 KAT6BQ8WYB5 2073 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 A0A1W2PP55 124 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 PHF20L1A8MW92 1017 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 NFKB1P19838 968 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 ST13P50502 369 aaKnown RBP9.76□□□□□ -0.85
SVIP-204ENST00000530199 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 PEAR1Q5VY43 1037 aaPredicted RBP9.76□□□□□ -0.85
SVIP-204ENST00000530199 ABHD17AQ96GS6 310 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 LATS2Q9NRM7 1088 aa9.76□□□□□ -0.85
SVIP-204ENST00000530199 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.76□□□□□ -0.85
SVIP-204ENST00000530199 RGPD5Q99666 1765 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 MAP3K6O95382 1288 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 PTPN12Q05209 780 aaKnown RBP9.75□□□□□ -0.85
SVIP-204ENST00000530199 GLIS3Q8NEA6 775 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 ZNF837Q96EG3 531 aaPredicted RBP9.75□□□□□ -0.85
SVIP-204ENST00000530199 DRC1Q96MC2 740 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 SLC30A3Q99726 388 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 EHD4Q9H223 541 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 CCSER2Q9H7U1 834 aa9.75□□□□□ -0.85
SVIP-204ENST00000530199 TLR7Q9NYK1 1049 aaKnown RBP9.75□□□□□ -0.85
SVIP-204ENST00000530199 POTECB2RU33 542 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 PSAPP07602 524 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 CD33P20138 364 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 ITGA6P23229 1130 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 SOX18P35713 384 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 HS2ST1Q7LGA3 356 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 CDK19Q9BWU1 502 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 PPP4R2Q9NY27 417 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
SVIP-204ENST00000530199 ATXN7L1Q9ULK2 861 aaPredicted RBP9.74□□□□□ -0.85
SVIP-204ENST00000530199 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.74□□□□□ -0.85
SVIP-204ENST00000530199 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
SVIP-204ENST00000530199 C5P01031 1676 aa9.74□□□□□ -0.85
SVIP-204ENST00000530199 VIRMAQ69YN4 1812 aaKnown RBP9.73□□□□□ -0.85
SVIP-204ENST00000530199 ARFGEF1Q9Y6D6 1849 aa9.73□□□□□ -0.85
SVIP-204ENST00000530199 GSTT1P30711 240 aa9.73□□□□□ -0.85
SVIP-204ENST00000530199 KCNH5Q8NCM2 988 aa9.73□□□□□ -0.85
SVIP-204ENST00000530199 BHMTQ93088 406 aa9.73□□□□□ -0.85
SVIP-204ENST00000530199 GLTPD2A6NH11 291 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 KIF4AO95239 1232 aa9.72□□□□□ -0.85
SVIP-204ENST00000530199 HOXD8P13378 290 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms