RNA–Protein interactions for RNA: ENST00000529970.5

ARHGEF12-208, Transcript of Rho guanine nucleotide exchange factor 12, human

TSL 2

Gene ARHGEF12, Length 3,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF12-208	ENST00000529970	SSC5D	A1L4H1	1573 aa		5.09	□□□□□ -1.59
ARHGEF12-208	ENST00000529970	CUL9	Q8IWT3	2517 aa		5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ITGA6	P23229	1130 aa		5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	HOXD11	P31277	338 aa	Predicted RBP	5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MRPS5	P82675	430 aa	Known RBP	5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	NOL9	Q5SY16	702 aa	Known RBP	5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	GIMAP6	Q6P9H5	292 aa		5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MRRF	Q96E11	262 aa	Known RBP	5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TMEM39B	Q9GZU3	492 aa		5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SEMA6B	Q9H3T3	888 aa		5.09	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CHL1	O00533	1208 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	FAM110C	Q1W6H9	321 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CCDC57	Q2TAC2	916 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MFSD14C	Q5VZR4	134 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ZNF521	Q96K83	1311 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	BECN1	Q14457	450 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SKIV2L	Q15477	1246 aa	Known RBP	5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MICAL1	Q8TDZ2	1067 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MYLIP	Q8WY64	445 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	NUDT12	Q9BQG2	462 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MTIF3	Q9H2K0	278 aa	Known RBP	5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	OGDHL	Q9ULD0	1010 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	GABRQ	Q9UN88	632 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TAF1	P21675	1872 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PSME4	Q14997	1843 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PEX14	O75381	377 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	GNAI1	P63096	354 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	UBE4A	Q14139	1066 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	KSR2	Q6VAB6	950 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SLF2	Q8IX21	1173 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ARRDC4	Q8NCT1	418 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	FAM151A	Q8WW52	585 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MRI	Q9BWK5	157 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SMC4	Q9NTJ3	1288 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SCN9A	Q15858	1988 aa		5.08	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	KBTBD13	C9JR72	458 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TMPO	P42166	694 aa	Known RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CHAF1A	Q13111	956 aa	Predicted RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CERS5	Q8N5B7	392 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	DIS3L	Q8TF46	1054 aa	Known RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	UHRF1	Q96T88	793 aa	Predicted RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PPME1	Q9Y570	386 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SYNGAP1	Q96PV0	1343 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	IGHD	P01880	384 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RGS2	P41220	211 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	IRX3	P78415	501 aa	Predicted RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	UBE3B	Q7Z3V4	1068 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SCYL3	Q8IZE3	742 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TDRD7	Q8NHU6	1098 aa	Known RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SGSM3	Q96HU1	749 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TEPSIN	Q96N21	525 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PLA2G12B	Q9BX93	195 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	AS3MT	Q9HBK9	375 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MAP3K2	Q9Y2U5	619 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CEP290	O15078	2479 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RAB11FIP3	O75154	756 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CCNA1	P78396	465 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	NFKBIB	Q15653	356 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	AKNAD1	Q5T1N1	836 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ITPRIP	Q8IWB1	547 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	VTI1A	Q96AJ9	217 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SLK	Q9H2G2	1235 aa	Predicted RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RWDD1	Q9H446	243 aa	Predicted RBP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	AGTPBP1	Q9UPW5	1226 aa		5.07	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TNRC18	O15417	2968 aa	Predicted RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CYP2C8	P10632	490 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PRKAR2A	P13861	404 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RFX1	P22670	979 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	MAPK4	P31152	587 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	CAP1	Q01518	475 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	C8orf34	Q49A92	452 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	LDHAL6A	Q6ZMR3	332 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ADAMTS19	Q8TE59	1207 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TSR2	Q969E8	191 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RNPC3	Q96LT9	517 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ZDHHC15	Q96MV8	337 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	GNL3L	Q9NVN8	582 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TMOD4	Q9NZQ9	345 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ZHX2	Q9Y6X8	837 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970		A0A0G2JLL6	359 aa	Predicted RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RIOK3	O14730	519 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	XRCC5	P13010	732 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	RARS	P54136	660 aa	Known RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TMEM31	Q5JXX7	168 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	HHIPL2	Q6UWX4	724 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PRRT2	Q7Z6L0	340 aa	Predicted RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TXNRD3	Q86VQ6	643 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	EXOC8	Q8IYI6	725 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PROCA1	Q8NCQ7	364 aa	Predicted RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ZKSCAN2	Q63HK3	967 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	ANKRD13C	Q8N6S4	541 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	WDR66	Q8TBY9	1149 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	JARID2	Q92833	1246 aa	Predicted RBP	5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	PLEKHF1	Q96S99	279 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	SLC5A4	Q9NY91	659 aa		5.06	□□□□□ -1.6
ARHGEF12-208	ENST00000529970	TNN	Q9UQP3	1299 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms