RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 MECOMQ03112 1051 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 MIGA2Q7L4E1 593 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 PXYLP1Q8TE99 480 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 FAM151AQ8WW52 585 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 PARK7Q99497 189 aaKnown RBP18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 CCDC8Q9H0W5 538 aaPredicted RBP18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 PAK6Q9NQU5 681 aaPredicted RBP18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 SNRKQ9NRH2 765 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 FAM198AQ9UFP1 575 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 EXOC6BQ9Y2D4 811 aa18.37■□□□□ 0.53
AP002884.3-204ENST00000529938 GAKO14976 1311 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 ELNP15502 786 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 CCDC158Q5M9N0 1113 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 C20orf194Q5TEA3 1177 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 NECAB2Q7Z6G3 386 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 ZNF384Q8TF68 577 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 TLR7Q9NYK1 1049 aaKnown RBP18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 DDX19BQ9UMR2 479 aa18.36■□□□□ 0.53
AP002884.3-204ENST00000529938 CYP2C8P10632 490 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 BTDP43251 543 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 GPAT2Q6NUI2 795 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 FAM163AQ96GL9 167 aaPredicted RBP18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 ZNF112Q9UJU3 913 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 DBNLQ9UJU6 430 aaKnown RBP18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 ZMYND8Q9ULU4 1186 aaPredicted RBP18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 MGAMO43451 1857 aa18.35■□□□□ 0.53
AP002884.3-204ENST00000529938 IRF5Q13568 498 aa18.34■□□□□ 0.53
AP002884.3-204ENST00000529938 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
AP002884.3-204ENST00000529938 C7orf61Q8IZ16 206 aa18.34■□□□□ 0.53
AP002884.3-204ENST00000529938 DIS3LQ8TF46 1054 aaKnown RBP18.34■□□□□ 0.53
AP002884.3-204ENST00000529938 NSUN4Q96CB9 384 aaKnown RBP18.34■□□□□ 0.53
AP002884.3-204ENST00000529938 MROH7-TTC4A0A0A0MT08 1334 aa18.33■□□□□ 0.53
AP002884.3-204ENST00000529938 RGS3P49796 1198 aa18.33■□□□□ 0.52
AP002884.3-204ENST00000529938 SIRT2Q8IXJ6 389 aa18.33■□□□□ 0.52
AP002884.3-204ENST00000529938 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
AP002884.3-204ENST00000529938 TDHQ8IZJ6 230 aa18.33■□□□□ 0.52
AP002884.3-204ENST00000529938 LRP2BPQ9P2M1 347 aa18.33■□□□□ 0.52
AP002884.3-204ENST00000529938 RPAP1Q9BWH6 1393 aaPredicted RBP18.32■□□□□ 0.52
AP002884.3-204ENST00000529938 GPR75-ASB3A0A0A6YYF3 556 aa18.32■□□□□ 0.52
AP002884.3-204ENST00000529938 APBB1O00213 710 aa18.32■□□□□ 0.52
AP002884.3-204ENST00000529938 CXCL11O14625 94 aa18.32■□□□□ 0.52
AP002884.3-204ENST00000529938 IDI2Q9BXS1 227 aa18.32■□□□□ 0.52
AP002884.3-204ENST00000529938 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
AP002884.3-204ENST00000529938 CYP2E1P05181 493 aaPredicted RBP18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 LDHCP07864 332 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 MAGEA10P43363 369 aaPredicted RBP18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 ZAP70P43403 619 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 GSTO1P78417 241 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 PICALMQ13492 652 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 NOL9Q5SY16 702 aaKnown RBP18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 ANKLE1Q8NAG6 615 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 DDX4Q9NQI0 724 aaKnown RBP18.31■□□□□ 0.52
AP002884.3-204ENST00000529938 MYH2Q9UKX2 1941 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 TNPO2O14787 897 aaKnown RBP18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 ENTPD3O75355 529 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 SYN1P17600 705 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 RHBDL3P58872 404 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 PDE3AQ14432 1141 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 SH3BP5LQ7L8J4 393 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 AACSQ86V21 672 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 ZSCAN29Q8IWY8 852 aaPredicted RBP18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 RHPN1Q8TCX5 695 aa18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
AP002884.3-204ENST00000529938 HMMRO75330 724 aa18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 SLURP2P0DP57 97 aa18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 FASTKD5Q7L8L6 764 aaKnown RBP18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 UBE2OQ9C0C9 1292 aaKnown RBP18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
AP002884.3-204ENST00000529938 DDTLA6NHG4 134 aaPredicted RBP18.28■□□□□ 0.52
AP002884.3-204ENST00000529938 NAA16Q6N069 864 aaPredicted RBP18.28■□□□□ 0.52
AP002884.3-204ENST00000529938 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
AP002884.3-204ENST00000529938 NBPF3Q9H094 633 aa18.28■□□□□ 0.52
AP002884.3-204ENST00000529938 TAOK2Q9UL54 1235 aa18.28■□□□□ 0.52
AP002884.3-204ENST00000529938 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
AP002884.3-204ENST00000529938 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
AP002884.3-204ENST00000529938 VCANP13611 3396 aa18.27■□□□□ 0.52
AP002884.3-204ENST00000529938 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
AP002884.3-204ENST00000529938 RPTORQ8N122 1335 aa18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 PRRT2Q7Z6L0 340 aaPredicted RBP18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 SH3RF3Q8TEJ3 882 aaPredicted RBP18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 COA7Q96BR5 231 aa18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 KIF1BPQ96EK5 621 aa18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.51
AP002884.3-204ENST00000529938 POTEB2H3BUK9 544 aa18.25■□□□□ 0.51
AP002884.3-204ENST00000529938 FAM109BQ6ICB4 259 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms