RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 MIGA2Q7L4E1 593 aa25.4■■□□□ 1.66
SMIM19-208ENST00000529505 SH3BP5LQ7L8J4 393 aa25.4■■□□□ 1.66
SMIM19-208ENST00000529505 PI4K2BQ8TCG2 481 aa25.4■■□□□ 1.66
SMIM19-208ENST00000529505 OTUD7AQ8TE49 926 aaPredicted RBP25.4■■□□□ 1.66
SMIM19-208ENST00000529505 ZNF112Q9UJU3 913 aa25.4■■□□□ 1.66
SMIM19-208ENST00000529505 IRF6O14896 467 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 CETPP11597 493 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 INPP5BP32019 993 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 ADD2P35612 726 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 PICALMQ13492 652 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 CHD1LQ86WJ1 897 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 OSBPL5Q9H0X9 879 aaPredicted RBP25.39■■□□□ 1.66
SMIM19-208ENST00000529505 ZFYVE28Q9HCC9 887 aa25.39■■□□□ 1.66
SMIM19-208ENST00000529505 ZCCHC17Q9NP64 241 aaKnown RBP25.39■■□□□ 1.66
SMIM19-208ENST00000529505 ATRNL1Q5VV63 1379 aa25.39■■□□□ 1.65
SMIM19-208ENST00000529505 ZNF532Q9HCE3 1301 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 DDTLA6NHG4 134 aaPredicted RBP25.38■■□□□ 1.65
SMIM19-208ENST00000529505 TBC1D12O60347 775 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 TSHZ3Q63HK5 1081 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 ZSCAN29Q8IWY8 852 aaPredicted RBP25.38■■□□□ 1.65
SMIM19-208ENST00000529505 KBTBD3Q8NAB2 608 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 MIGA1Q8NAN2 632 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 RIOK1Q9BRS2 568 aaKnown RBP25.38■■□□□ 1.65
SMIM19-208ENST00000529505 DHX36Q9H2U1 1008 aaKnown RBP25.38■■□□□ 1.65
SMIM19-208ENST00000529505 PTPN22Q9Y2R2 807 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 MAST2Q6P0Q8 1798 aa25.38■■□□□ 1.65
SMIM19-208ENST00000529505 DOCK2Q92608 1830 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 MYO5AQ9Y4I1 1855 aaKnown RBP25.37■■□□□ 1.65
SMIM19-208ENST00000529505 COL2A1P02458 1487 aaPredicted RBP25.37■■□□□ 1.65
SMIM19-208ENST00000529505 MAGEB6P1A0A0J9YX57 407 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 DYNLL1P63167 89 aaKnown RBP25.37■■□□□ 1.65
SMIM19-208ENST00000529505 PPATQ06203 517 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 SNAPC2Q13487 334 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 B4GALNT3Q6L9W6 998 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 TGFBRAP1Q8WUH2 860 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 LNPKQ9C0E8 428 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 EFCC1Q9HA90 598 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 CENPFP49454 3210 aa25.37■■□□□ 1.65
SMIM19-208ENST00000529505 KIAA0100Q14667 2235 aaKnown RBP25.37■■□□□ 1.65
SMIM19-208ENST00000529505 BTBD19C9JJ37 291 aa25.36■■□□□ 1.65
SMIM19-208ENST00000529505 PDE1AP54750 535 aa25.36■■□□□ 1.65
SMIM19-208ENST00000529505 LRRFIP1Q32MZ4 808 aaKnown RBP25.36■■□□□ 1.65
SMIM19-208ENST00000529505 NOL9Q5SY16 702 aaKnown RBP25.35■■□□□ 1.65
SMIM19-208ENST00000529505 PI4KBQ9UBF8 816 aa25.35■■□□□ 1.65
SMIM19-208ENST00000529505 RBBP6Q7Z6E9 1792 aaKnown RBP25.34■■□□□ 1.65
SMIM19-208ENST00000529505 ZFYP08048 801 aaPredicted RBP25.34■■□□□ 1.65
SMIM19-208ENST00000529505 KCNH4Q9UQ05 1017 aa25.34■■□□□ 1.65
SMIM19-208ENST00000529505 FLT1P17948 1338 aa25.34■■□□□ 1.65
SMIM19-208ENST00000529505 TLR2O60603 784 aa25.33■■□□□ 1.65
SMIM19-208ENST00000529505 TICAM2Q86XR7 235 aa25.33■■□□□ 1.65
SMIM19-208ENST00000529505 FOXP4Q8IVH2 680 aaPredicted RBP25.33■■□□□ 1.65
SMIM19-208ENST00000529505 MAPKAPK5Q8IW41 473 aa25.33■■□□□ 1.65
SMIM19-208ENST00000529505 ARMC5Q96C12 935 aa25.33■■□□□ 1.65
SMIM19-208ENST00000529505 PHF20L1A8MW92 1017 aa25.32■■□□□ 1.64
SMIM19-208ENST00000529505 USP5P45974 858 aa25.32■■□□□ 1.64
SMIM19-208ENST00000529505 METTL16Q86W50 562 aaKnown RBP25.32■■□□□ 1.64
SMIM19-208ENST00000529505 CRNKL1Q9BZJ0 848 aaKnown RBP25.32■■□□□ 1.64
SMIM19-208ENST00000529505 OSBPL3Q9H4L5 887 aa25.32■■□□□ 1.64
SMIM19-208ENST00000529505 HERC5Q9UII4 1024 aaKnown RBP25.32■■□□□ 1.64
SMIM19-208ENST00000529505 RNF113AO15541 343 aaKnown RBP25.31■■□□□ 1.64
SMIM19-208ENST00000529505 PLEKHM2Q8IWE5 1019 aa25.3■■□□□ 1.64
SMIM19-208ENST00000529505 ZSWIM8A7E2V4 1837 aa25.3■■□□□ 1.64
SMIM19-208ENST00000529505 MOGSQ13724 837 aa25.29■■□□□ 1.64
SMIM19-208ENST00000529505 ARHGEF6Q15052 776 aa25.29■■□□□ 1.64
SMIM19-208ENST00000529505 ANKRD23Q86SG2 305 aa25.29■■□□□ 1.64
SMIM19-208ENST00000529505 EVI5LQ96CN4 794 aa25.29■■□□□ 1.64
SMIM19-208ENST00000529505 PALD1Q9ULE6 856 aa25.29■■□□□ 1.64
SMIM19-208ENST00000529505 BRCA2P51587 3418 aa25.29■■□□□ 1.64
SMIM19-208ENST00000529505 CTNND1O60716 968 aaKnown RBP25.28■■□□□ 1.64
SMIM19-208ENST00000529505 SLC34A2O95436 690 aa25.28■■□□□ 1.64
SMIM19-208ENST00000529505 SLFNL1Q499Z3 407 aa25.28■■□□□ 1.64
SMIM19-208ENST00000529505 LCORLQ8N3X6 602 aa25.28■■□□□ 1.64
SMIM19-208ENST00000529505 APPBP2Q92624 585 aa25.28■■□□□ 1.64
SMIM19-208ENST00000529505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.28■■□□□ 1.64
SMIM19-208ENST00000529505 ATP8A2Q9NTI2 1148 aa25.28■■□□□ 1.64
SMIM19-208ENST00000529505 ADGRA2Q96PE1 1338 aa25.28■■□□□ 1.64
SMIM19-208ENST00000529505 MKI67P46013 3256 aaKnown RBP25.27■■□□□ 1.64
SMIM19-208ENST00000529505 POTEFA5A3E0 1075 aa25.27■■□□□ 1.64
SMIM19-208ENST00000529505 HLA-DOAP06340 250 aa25.27■■□□□ 1.64
SMIM19-208ENST00000529505 LACTBP83111 547 aaPredicted RBP25.27■■□□□ 1.64
SMIM19-208ENST00000529505 TTC6Q86TZ1 520 aa25.27■■□□□ 1.64
SMIM19-208ENST00000529505 PUS7LQ9H0K6 701 aaKnown RBP25.27■■□□□ 1.64
SMIM19-208ENST00000529505 MBD4O95243 580 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 CHGBP05060 677 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 PRPF38BQ5VTL8 546 aaKnown RBP25.26■■□□□ 1.63
SMIM19-208ENST00000529505 C17orf99Q6UX52 265 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 SCYL3Q8IZE3 742 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 ARMT1Q9H993 441 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 TAOK2Q9UL54 1235 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 PTCH2Q9Y6C5 1203 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 DOCK1Q14185 1865 aa25.26■■□□□ 1.63
SMIM19-208ENST00000529505 CXCL11O14625 94 aa25.25■■□□□ 1.63
SMIM19-208ENST00000529505 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
SMIM19-208ENST00000529505 ZNF333Q96JL9 665 aa25.25■■□□□ 1.63
SMIM19-208ENST00000529505 STRBPQ96SI9 672 aaKnown RBP25.25■■□□□ 1.63
SMIM19-208ENST00000529505 FSD1Q9BTV5 496 aa25.25■■□□□ 1.63
SMIM19-208ENST00000529505 ARHGAP39Q9C0H5 1083 aa25.25■■□□□ 1.63
SMIM19-208ENST00000529505 EHD4Q9H223 541 aa25.25■■□□□ 1.63
SMIM19-208ENST00000529505 DCP1AQ9NPI6 582 aaPredicted RBP25.25■■□□□ 1.63
SMIM19-208ENST00000529505 SAP30BPQ9UHR5 308 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms