RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
CPSF1-204ENST00000529288 PRKCZQ05513 592 aa15.91■□□□□ 0.14
CPSF1-204ENST00000529288 MTFR1Q15390 333 aa15.91■□□□□ 0.14
CPSF1-204ENST00000529288 PIH1D3Q9NQM4 214 aaKnown RBP15.91■□□□□ 0.14
CPSF1-204ENST00000529288 SAP30BPQ9UHR5 308 aaKnown RBP15.91■□□□□ 0.14
CPSF1-204ENST00000529288 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
CPSF1-204ENST00000529288 IDH1O75874 414 aaKnown RBP15.9■□□□□ 0.14
CPSF1-204ENST00000529288 BCRP11274 1271 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 PLCG2P16885 1265 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 CYP7A1P22680 504 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 GRK4P32298 578 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 TREML2Q5T2D2 321 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 CRACR2BQ8N4Y2 399 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-204ENST00000529288 EAF2Q96CJ1 260 aaPredicted RBP15.9■□□□□ 0.14
CPSF1-204ENST00000529288 PI4KBQ9UBF8 816 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 DBNLQ9UJU6 430 aaKnown RBP15.9■□□□□ 0.14
CPSF1-204ENST00000529288 GABRQQ9UN88 632 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 EXOC6BQ9Y2D4 811 aa15.9■□□□□ 0.14
CPSF1-204ENST00000529288 NOP58Q9Y2X3 529 aaKnown RBP15.9■□□□□ 0.14
CPSF1-204ENST00000529288 USP17L5A8MUK1 530 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 APBB1O00213 710 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 CAP2P40123 477 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 DYNLL1P63167 89 aaKnown RBP15.89■□□□□ 0.13
CPSF1-204ENST00000529288 RRP1BQ14684 758 aaKnown RBP15.89■□□□□ 0.13
CPSF1-204ENST00000529288 CEP85Q6P2H3 762 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 ADGRA1Q86SQ6 560 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 ANKRD13CQ8N6S4 541 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 AGTPBP1Q9UPW5 1226 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 NDUFB9Q9Y6M9 179 aa15.89■□□□□ 0.13
CPSF1-204ENST00000529288 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
CPSF1-204ENST00000529288 HMGCS2P54868 508 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 AACSQ86V21 672 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 MIGA1Q8NAN2 632 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 DHX36Q9H2U1 1008 aaKnown RBP15.88■□□□□ 0.13
CPSF1-204ENST00000529288 AS3MTQ9HBK9 375 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 HERC5Q9UII4 1024 aaKnown RBP15.88■□□□□ 0.13
CPSF1-204ENST00000529288 PNMA3Q9UL41 463 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 PALD1Q9ULE6 856 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 SLC45A1Q9Y2W3 748 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 ZSWIM8A7E2V4 1837 aa15.88■□□□□ 0.13
CPSF1-204ENST00000529288 DOCK2Q92608 1830 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 CCL5P13501 91 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 PPP4CP60510 307 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 UBXN2AP68543 259 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 MAGEB6Q8N7X4 407 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 ZNF512BQ96KM6 892 aaPredicted RBP15.87■□□□□ 0.13
CPSF1-204ENST00000529288 RNF208Q9H0X6 261 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 FLT1P17948 1338 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
CPSF1-204ENST00000529288 GDF11O95390 407 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 HLA-DOAP06340 250 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 USP5P45974 858 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 FLT3LGP49771 235 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.13
CPSF1-204ENST00000529288 ERC1Q8IUD2 1116 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 GCC1Q96CN9 775 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 CENPFP49454 3210 aa15.86■□□□□ 0.13
CPSF1-204ENST00000529288 ADCY3O60266 1144 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 MS4A1P11836 297 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 ELNP15502 786 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 FOXP4Q8IVH2 680 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-204ENST00000529288 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-204ENST00000529288 SLAIN1Q8ND83 568 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 COA7Q96BR5 231 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 TBC1D2Q9BYX2 928 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 ANTXR1Q9H6X2 564 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 TMOD4Q9NZQ9 345 aa15.85■□□□□ 0.13
CPSF1-204ENST00000529288 COL2A1P02458 1487 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-204ENST00000529288 PDE4DIPQ5VU43 2346 aa15.84■□□□□ 0.13
CPSF1-204ENST00000529288 JAG1P78504 1218 aa15.84■□□□□ 0.13
CPSF1-204ENST00000529288 MAP3K12Q12852 859 aa15.84■□□□□ 0.13
CPSF1-204ENST00000529288 MTMR2Q13614 643 aa15.84■□□□□ 0.13
CPSF1-204ENST00000529288 SHROOM1Q2M3G4 852 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-204ENST00000529288 DPF3Q92784 378 aa15.84■□□□□ 0.13
CPSF1-204ENST00000529288 COG6Q9Y2V7 657 aa15.84■□□□□ 0.13
CPSF1-204ENST00000529288 ASNSP08243 561 aa15.83■□□□□ 0.12
CPSF1-204ENST00000529288 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-204ENST00000529288 HSP90AB4PQ58FF6 505 aa15.83■□□□□ 0.12
CPSF1-204ENST00000529288 NKX2-3Q8TAU0 364 aa15.83■□□□□ 0.12
CPSF1-204ENST00000529288 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
CPSF1-204ENST00000529288 UNC93B1Q9H1C4 597 aa15.83■□□□□ 0.12
CPSF1-204ENST00000529288 ASCC2Q9H1I8 757 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-204ENST00000529288 INHAP05111 366 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 GJB1P08034 283 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 GCLCP48506 637 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-204ENST00000529288 FAM110CQ1W6H9 321 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 SHISA4Q96DD7 197 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 WDR18Q9BV38 432 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 DNAJC18Q9H819 358 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 DOCK1Q14185 1865 aa15.82■□□□□ 0.12
CPSF1-204ENST00000529288 USP17L10C9JJH3 530 aa15.81■□□□□ 0.12
CPSF1-204ENST00000529288 TFRCP02786 760 aaKnown RBP15.81■□□□□ 0.12
CPSF1-204ENST00000529288 IFIT2P09913 472 aaKnown RBP15.81■□□□□ 0.12
CPSF1-204ENST00000529288 GJA8P48165 433 aa15.81■□□□□ 0.12
CPSF1-204ENST00000529288 BACE1P56817 501 aa15.81■□□□□ 0.12
CPSF1-204ENST00000529288 SH3D19Q5HYK7 790 aa15.81■□□□□ 0.12
CPSF1-204ENST00000529288 HABP4Q5JVS0 413 aaKnown RBP15.81■□□□□ 0.12
CPSF1-204ENST00000529288 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms