RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 TRIOBPQ9H2D6 2365 aa16.7■□□□□ 0.26
HIF3A-212ENST00000529205 DOCK1Q14185 1865 aa16.69■□□□□ 0.26
HIF3A-212ENST00000529205 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
HIF3A-212ENST00000529205 ADORA1P30542 326 aa16.69■□□□□ 0.26
HIF3A-212ENST00000529205 MECOMQ03112 1051 aa16.69■□□□□ 0.26
HIF3A-212ENST00000529205 GORABQ5T7V8 394 aa16.69■□□□□ 0.26
HIF3A-212ENST00000529205 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
HIF3A-212ENST00000529205 DIS3LQ8TF46 1054 aaKnown RBP16.69■□□□□ 0.26
HIF3A-212ENST00000529205 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
HIF3A-212ENST00000529205 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
HIF3A-212ENST00000529205 MYH2Q9UKX2 1941 aa16.68■□□□□ 0.26
HIF3A-212ENST00000529205 A0A1B0GUL7 405 aa16.68■□□□□ 0.26
HIF3A-212ENST00000529205 CAP2P40123 477 aa16.68■□□□□ 0.26
HIF3A-212ENST00000529205 HMGCS2P54868 508 aa16.68■□□□□ 0.26
HIF3A-212ENST00000529205 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-212ENST00000529205 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
HIF3A-212ENST00000529205 XAGE2Q96GT9 111 aa16.68■□□□□ 0.26
HIF3A-212ENST00000529205 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
HIF3A-212ENST00000529205 ASCC2Q9H1I8 757 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-212ENST00000529205 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-212ENST00000529205 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
HIF3A-212ENST00000529205 FAM196BA6NMK8 535 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
HIF3A-212ENST00000529205 RHBDL3P58872 404 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
HIF3A-212ENST00000529205 DEFB123Q8N688 67 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 NEUROD6Q96NK8 337 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 TMOD4Q9NZQ9 345 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 HERC5Q9UII4 1024 aaKnown RBP16.67■□□□□ 0.26
HIF3A-212ENST00000529205 GJD2Q9UKL4 321 aa16.67■□□□□ 0.26
HIF3A-212ENST00000529205 SLFN5Q08AF3 891 aa16.66■□□□□ 0.26
HIF3A-212ENST00000529205 PDE3AQ14432 1141 aa16.66■□□□□ 0.26
HIF3A-212ENST00000529205 LRIT3Q3SXY7 679 aa16.66■□□□□ 0.26
HIF3A-212ENST00000529205 TDHQ8IZJ6 230 aa16.66■□□□□ 0.26
HIF3A-212ENST00000529205 SOCS4Q8WXH5 440 aa16.66■□□□□ 0.26
HIF3A-212ENST00000529205 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
HIF3A-212ENST00000529205 SYN1P17600 705 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 CYP2B6P20813 491 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 TFCP2Q12800 502 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 UBE2OQ9C0C9 1292 aaKnown RBP16.65■□□□□ 0.26
HIF3A-212ENST00000529205 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
HIF3A-212ENST00000529205 PI4KBQ9UBF8 816 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 MORF4L1Q9UBU8 362 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
HIF3A-212ENST00000529205 NOB1Q9ULX3 412 aaKnown RBP16.65■□□□□ 0.26
HIF3A-212ENST00000529205 COL2A1P02458 1487 aaPredicted RBP16.65■□□□□ 0.26
HIF3A-212ENST00000529205 CEP290O15078 2479 aa16.64■□□□□ 0.26
HIF3A-212ENST00000529205 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 BAG3O95817 575 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 ASNSP08243 561 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
HIF3A-212ENST00000529205 XRCC5P13010 732 aaKnown RBP16.64■□□□□ 0.25
HIF3A-212ENST00000529205 TEX11Q8IYF3 940 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 GPRC5AQ8NFJ5 357 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
HIF3A-212ENST00000529205 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 LRP2BPQ9P2M1 347 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 PTPRFP10586 1907 aa16.64■□□□□ 0.25
HIF3A-212ENST00000529205 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 GNAI3P08754 354 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 MAPK4P31152 587 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 HOXA7P31268 230 aaPredicted RBP16.63■□□□□ 0.25
HIF3A-212ENST00000529205 MAGEA10P43363 369 aaPredicted RBP16.63■□□□□ 0.25
HIF3A-212ENST00000529205 BACE1P56817 501 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 TRIM32Q13049 653 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
HIF3A-212ENST00000529205 TRIB2Q92519 343 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 WDR18Q9BV38 432 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 CWC22Q9HCG8 908 aaKnown RBP16.63■□□□□ 0.25
HIF3A-212ENST00000529205 STXBP5LQ9Y2K9 1186 aa16.63■□□□□ 0.25
HIF3A-212ENST00000529205 SZT2Q5T011 3432 aa16.62■□□□□ 0.25
HIF3A-212ENST00000529205 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
HIF3A-212ENST00000529205 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
HIF3A-212ENST00000529205 PLCG2P16885 1265 aa16.62■□□□□ 0.25
HIF3A-212ENST00000529205 ZKSCAN1P17029 563 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-212ENST00000529205 MTMR2Q13614 643 aa16.62■□□□□ 0.25
HIF3A-212ENST00000529205 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-212ENST00000529205 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
HIF3A-212ENST00000529205 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
HIF3A-212ENST00000529205 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
HIF3A-212ENST00000529205 HERVK_113P62684 666 aa16.61■□□□□ 0.25
HIF3A-212ENST00000529205 TBC1D9Q6ZT07 1266 aa16.61■□□□□ 0.25
HIF3A-212ENST00000529205 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
HIF3A-212ENST00000529205 MEIS3Q99687 375 aa16.61■□□□□ 0.25
HIF3A-212ENST00000529205 LOC285556D6RIA3 1793 aa16.6■□□□□ 0.25
HIF3A-212ENST00000529205 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
HIF3A-212ENST00000529205 RGS2P41220 211 aa16.6■□□□□ 0.25
HIF3A-212ENST00000529205 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
HIF3A-212ENST00000529205 MAP3K21Q5TCX8 1036 aa16.6■□□□□ 0.25
HIF3A-212ENST00000529205 ATF7IPQ6VMQ6 1270 aa16.6■□□□□ 0.25
HIF3A-212ENST00000529205 ZNF384Q8TF68 577 aa16.6■□□□□ 0.25
HIF3A-212ENST00000529205 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
HIF3A-212ENST00000529205 ARID4AP29374 1257 aaPredicted RBP16.59■□□□□ 0.25
HIF3A-212ENST00000529205 NAA16Q6N069 864 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms