RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PSMA5P28066 241 aa29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 RUFY3Q7L099 469 aa29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 FAM83AQ86UY5 434 aa29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 DHX36Q9H2U1 1008 aaKnown RBP29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 TAF1DQ9H5J8 278 aaPredicted RBP29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 FAM196BA6NMK8 535 aa29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 BLOC1S2Q6QNY1 142 aa29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 NCOA7Q8NI08 942 aa29.27■■■□□ 2.28
LDLRAD3-203ENST00000528989 FGRP09769 529 aa29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 ZNF526Q8TF50 670 aaPredicted RBP29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 CSRNP1Q96S65 589 aa29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 LRRC2Q9BYS8 371 aa29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 DEFB129Q9H1M3 183 aa29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 PGAP2Q9UHJ9 254 aa29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 CYP46A1Q9Y6A2 500 aa29.26■■■□□ 2.27
LDLRAD3-203ENST00000528989 GABPAQ06546 454 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 TRDNQ13061 729 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 PRAMEF18Q5VWM3 479 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 MB21D2Q8IYB1 491 aaPredicted RBP29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 RNF41Q9H4P4 317 aaPredicted RBP29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 ZSWIM5Q9P217 1185 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 PI4KBQ9UBF8 816 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 SERPINB13Q9UIV8 391 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 LAMA4Q16363 1823 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 IQCA1LA6NCM1 817 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 KDM4AO75164 1064 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 HLA-DOAP06340 250 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 SLC3A2P08195 630 aaKnown RBP29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 CDK8P49336 464 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 EAPPQ56P03 285 aaPredicted RBP29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 C16orf86Q6ZW13 317 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 CYB5R4Q7L1T6 521 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 RALYLQ86SE5 291 aaKnown RBP29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 RRAGCQ9HB90 399 aa29.25■■■□□ 2.27
LDLRAD3-203ENST00000528989 ATRNL1Q5VV63 1379 aa29.24■■■□□ 2.27
LDLRAD3-203ENST00000528989 ROBO3Q96MS0 1386 aa29.24■■■□□ 2.27
LDLRAD3-203ENST00000528989 RPS6KB1P23443 525 aa29.24■■■□□ 2.27
LDLRAD3-203ENST00000528989 DLK2Q6UY11 383 aa29.24■■■□□ 2.27
LDLRAD3-203ENST00000528989 USP50Q70EL3 339 aaPredicted RBP29.24■■■□□ 2.27
LDLRAD3-203ENST00000528989 DNAJC18Q9H819 358 aa29.24■■■□□ 2.27
LDLRAD3-203ENST00000528989 ANTXR2P58335 489 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 PDE4BQ07343 736 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 TNFAIP1Q13829 316 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 DHX32Q7L7V1 743 aaKnown RBP29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 TEPSINQ96N21 525 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 LARP6Q9BRS8 491 aaKnown RBP29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 MKNK2Q9HBH9 465 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 TNNI2P48788 182 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 EXOSC10Q01780 885 aaKnown RBP29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 FAM47AQ5JRC9 791 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 TTC14Q96N46 770 aa29.23■■■□□ 2.27
LDLRAD3-203ENST00000528989 RANBP6O60518 1105 aaKnown RBP29.22■■■□□ 2.27
LDLRAD3-203ENST00000528989 POTEIP0CG38 1075 aa29.22■■■□□ 2.27
LDLRAD3-203ENST00000528989 POTEJP0CG39 1038 aa29.22■■■□□ 2.27
LDLRAD3-203ENST00000528989 KRT23Q9C075 422 aa29.22■■■□□ 2.27
LDLRAD3-203ENST00000528989 CNNM2Q9H8M5 875 aa29.22■■■□□ 2.27
LDLRAD3-203ENST00000528989 PDRG1Q9NUG6 133 aa29.22■■■□□ 2.27
LDLRAD3-203ENST00000528989 LAMB1P07942 1786 aa29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 MIGA2Q7L4E1 593 aa29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 ORC4O43929 436 aa29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 HMGB1P09429 215 aaKnown RBP29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 APOBEC3FQ8IUX4 373 aaKnown RBP29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 CRACR2BQ8N4Y2 399 aaPredicted RBP29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 ZKSCAN3Q9BRR0 538 aa29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 EHD4Q9H223 541 aa29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 GPHNQ9NQX3 736 aaPredicted RBP29.21■■■□□ 2.27
LDLRAD3-203ENST00000528989 WDR90Q96KV7 1748 aa29.2■■■□□ 2.27
LDLRAD3-203ENST00000528989 NMRK2Q9NPI5 230 aa29.2■■■□□ 2.26
LDLRAD3-203ENST00000528989 PRC1O43663 620 aa29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 RASA1P20936 1047 aa29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 MCM5P33992 734 aa29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 SHMT1P34896 483 aa29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 NOL8Q76FK4 1167 aaKnown RBP29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 FOXP4Q8IVH2 680 aaPredicted RBP29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 PCP11498 1178 aaKnown RBP29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 NBPF12Q5TAG4 269 aaPredicted RBP29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 ESR2Q92731 530 aa29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 DCPSQ96C86 337 aaKnown RBP29.19■■■□□ 2.26
LDLRAD3-203ENST00000528989 VEGFAP15692 232 aaPredicted RBP29.18■■■□□ 2.26
LDLRAD3-203ENST00000528989 ANP32AP39687 249 aaKnown RBP29.18■■■□□ 2.26
LDLRAD3-203ENST00000528989 AK2P54819 239 aa29.18■■■□□ 2.26
LDLRAD3-203ENST00000528989 METTL16Q86W50 562 aaKnown RBP29.18■■■□□ 2.26
LDLRAD3-203ENST00000528989 COL2A1P02458 1487 aaPredicted RBP29.18■■■□□ 2.26
LDLRAD3-203ENST00000528989 SCN4AP35499 1836 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 TFAP4Q01664 338 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 Q6ZUG5 572 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 PNMA8AQ86V59 439 aaPredicted RBP29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 ZNF444Q8N0Y2 327 aaPredicted RBP29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 SIPA1L1O43166 1804 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 ADM5C9JUS6 153 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 ST18O60284 1047 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 NMT2O60551 498 aa29.17■■■□□ 2.26
LDLRAD3-203ENST00000528989 PITPNM2Q9BZ72 1349 aa29.16■■■□□ 2.26
LDLRAD3-203ENST00000528989 POLR2AP24928 1970 aaKnown RBP29.16■■■□□ 2.26
LDLRAD3-203ENST00000528989 TOB2Q14106 344 aaPredicted RBP29.16■■■□□ 2.26
LDLRAD3-203ENST00000528989 SHROOM1Q2M3G4 852 aaPredicted RBP29.16■■■□□ 2.26
LDLRAD3-203ENST00000528989 ZC3H15Q8WU90 426 aaKnown RBP29.16■■■□□ 2.26
LDLRAD3-203ENST00000528989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.16■■■□□ 2.26
LDLRAD3-203ENST00000528989 TSPY2A6NKD2 308 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms