RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 GCKRQ14397 625 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 OGFOD1Q8N543 542 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 LINS1Q8NG48 757 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 PXYLP1Q8TE99 480 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 EPHX3Q9H6B9 360 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 ELP3Q9H9T3 547 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 C11orf16Q9NQ32 467 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 ZNF804BA4D1E1 1349 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 PFASO15067 1338 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 MYO3BQ8WXR4 1341 aa10.73□□□□□ -0.69
SSBP3-212ENST00000528930 ADCY3O60266 1144 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 GPR37L1O60883 481 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
SSBP3-212ENST00000528930 RPS8P62241 208 aaKnown RBP10.72□□□□□ -0.69
SSBP3-212ENST00000528930 NBR1Q14596 966 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 DACT2Q5SW24 774 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 PODNQ7Z5L7 613 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 TTLL11Q8NHH1 800 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 NECAB3Q96P71 396 aaPredicted RBP10.72□□□□□ -0.69
SSBP3-212ENST00000528930 C11orf49Q9H6J7 331 aa10.72□□□□□ -0.69
SSBP3-212ENST00000528930 BTBD19C9JJ37 291 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 MAP3K7O43318 606 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 GFRA3O60609 400 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 FMNL1O95466 1100 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-212ENST00000528930 CACNA1BQ00975 2339 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 SUPT20HL1Q3ZLR7 823 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 UBE3BQ7Z3V4 1068 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 SSH1Q8WYL5 1049 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 CCDC85AQ96PX6 553 aaPredicted RBP10.71□□□□□ -0.69
SSBP3-212ENST00000528930 PLA2G12BQ9BX93 195 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.71□□□□□ -0.69
SSBP3-212ENST00000528930 GABRQQ9UN88 632 aa10.71□□□□□ -0.69
SSBP3-212ENST00000528930 SPEF2Q9C093 1822 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 UFL1O94874 794 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 ELNP15502 786 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 CTSWP56202 376 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 PPP4CP60510 307 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 NBPF12Q5TAG4 269 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-212ENST00000528930 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
SSBP3-212ENST00000528930 PACS2Q86VP3 889 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 MXD3Q9BW11 206 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 CPA4Q9UI42 421 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 MYH3P11055 1940 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 LRRC37A2A6NM11 1700 aa10.7□□□□□ -0.7
SSBP3-212ENST00000528930 CSF1RP07333 972 aa10.69□□□□□ -0.7
SSBP3-212ENST00000528930 NHLH1Q02575 133 aa10.69□□□□□ -0.7
SSBP3-212ENST00000528930 IRF5Q13568 498 aa10.69□□□□□ -0.7
SSBP3-212ENST00000528930 ALDH1L2Q3SY69 923 aa10.69□□□□□ -0.7
SSBP3-212ENST00000528930 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
SSBP3-212ENST00000528930 GREM2Q9H772 168 aa10.69□□□□□ -0.7
SSBP3-212ENST00000528930 PLXNB2O15031 1838 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 ZNF318Q5VUA4 2279 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 CETPP11597 493 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 COL6A1P12109 1028 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 FCGRTP55899 365 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 VGLL4Q14135 290 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 GRIN2CQ14957 1233 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 GGA1Q9UJY5 639 aa10.68□□□□□ -0.7
SSBP3-212ENST00000528930 PTPRCP08575 1304 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 PTPRFP10586 1907 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 RLFQ13129 1914 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 SPDYE5A6NIY4 337 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 ALDH1L1O75891 902 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 CT47B1P0C2W7 299 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-212ENST00000528930 BMP1P13497 986 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 FLT3LGP49771 235 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 FOXO4P98177 505 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 SHHQ15465 462 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 AKNAD1Q5T1N1 836 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 STRIP1Q5VSL9 837 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 SLC4A10Q6U841 1118 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 ANKRD18AQ8IVF6 992 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 IL27Q8NEV9 243 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 CDC5LQ99459 802 aaKnown RBP10.67□□□□□ -0.7
SSBP3-212ENST00000528930 SRCIN1Q9C0H9 1055 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 FAM198AQ9UFP1 575 aa10.67□□□□□ -0.7
SSBP3-212ENST00000528930 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 GRM8O00222 908 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 BCRP11274 1271 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 EPHA10Q5JZY3 1008 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 C9orf50Q5SZB4 431 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 TRAF7Q6Q0C0 670 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 LBHD1Q9BQE6 289 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-212ENST00000528930 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 BSDC1Q9NW68 430 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-212ENST00000528930 OGDHLQ9ULD0 1010 aa10.66□□□□□ -0.7
SSBP3-212ENST00000528930 MED23Q9ULK4 1368 aa10.65□□□□□ -0.7
SSBP3-212ENST00000528930 UTYO14607 1347 aa10.65□□□□□ -0.7
SSBP3-212ENST00000528930 CENPBP07199 599 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-212ENST00000528930 NBPF7P0C2Y1 421 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-212ENST00000528930 ITGA6P23229 1130 aa10.65□□□□□ -0.7
SSBP3-212ENST00000528930 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.65□□□□□ -0.75e-6■■□□□ 11.5
SSBP3-212ENST00000528930 KAZALD1Q96I82 304 aa10.65□□□□□ -0.7
SSBP3-212ENST00000528930 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
SSBP3-212ENST00000528930 MINPP1Q9UNW1 487 aa10.65□□□□□ -0.7
SSBP3-212ENST00000528930 PKD1L2Q7Z442 2459 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms