RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
USF1-208ENST00000528768 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
USF1-208ENST00000528768 MTMR6Q9Y217 621 aa13.81□□□□□ -0.2
USF1-208ENST00000528768 SCN9AQ15858 1988 aa13.81□□□□□ -0.2
USF1-208ENST00000528768 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
USF1-208ENST00000528768 HTTP42858 3142 aa13.81□□□□□ -0.2
USF1-208ENST00000528768 TAF1P21675 1872 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 ZAP70P43403 619 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 NASPP49321 788 aaPredicted RBP13.8□□□□□ -0.2
USF1-208ENST00000528768 KRT85P78386 507 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 CCDC173Q0VFZ6 552 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 TOB2Q14106 344 aaPredicted RBP13.8□□□□□ -0.2
USF1-208ENST00000528768 LDLRAD1Q5T700 205 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 NBPF11Q86T75 865 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 IFNL1Q8IU54 200 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 APOBEC3FQ8IUX4 373 aaKnown RBP13.8□□□□□ -0.2
USF1-208ENST00000528768 NECAB1Q8N987 351 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 GTF3C6Q969F1 213 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 CDC5LQ99459 802 aaKnown RBP13.8□□□□□ -0.2
USF1-208ENST00000528768 PSME4Q14997 1843 aa13.8□□□□□ -0.2
USF1-208ENST00000528768 CEP290O15078 2479 aa13.79□□□□□ -0.2
USF1-208ENST00000528768 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
USF1-208ENST00000528768 MKRN3Q13064 507 aaKnown RBP13.79□□□□□ -0.2
USF1-208ENST00000528768 UBE3CQ15386 1083 aa13.79□□□□□ -0.2
USF1-208ENST00000528768 R3HDMLQ9H3Y0 253 aa13.79□□□□□ -0.2
USF1-208ENST00000528768 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
USF1-208ENST00000528768 MYH3P11055 1940 aa13.79□□□□□ -0.2
USF1-208ENST00000528768 TRIOBPQ9H2D6 2365 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 E7EWF7 191 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 H3BQV1 296 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 DLL1O00548 723 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 PFKFB2O60825 505 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 EN2P19622 333 aaPredicted RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 ARID4AP29374 1257 aaPredicted RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 MAP3K12Q12852 859 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 TRDNQ13061 729 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 NBPF9Q3BBW0 867 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 CCDC183Q5T5S1 534 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 RALYLQ86SE5 291 aaKnown RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 SLC10A4Q96EP9 437 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 ZSCAN16Q9H4T2 348 aaPredicted RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 XDHP47989 1333 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
USF1-208ENST00000528768 COL1A1P02452 1464 aaPredicted RBP13.78□□□□□ -0.2
USF1-208ENST00000528768 M0R2C6 588 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 WNT10BO00744 389 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 ZNF213O14771 459 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 ATP2B4P23634 1241 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 ADD2P35612 726 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 EXOSC10Q01780 885 aaKnown RBP13.77□□□□□ -0.21
USF1-208ENST00000528768 MAP3K11Q16584 847 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 GAS2L3Q86XJ1 694 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 BRF1Q92994 677 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 OSBP2Q969R2 916 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.21
USF1-208ENST00000528768 CNPY2Q9Y2B0 182 aa13.77□□□□□ -0.21
USF1-208ENST00000528768 GOLGA6L4A6NEF3 574 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
USF1-208ENST00000528768 MCM5P33992 734 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 STK3Q13188 491 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 ZNF333Q96JL9 665 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 TCEANC2Q96MN5 208 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 AGXT2Q9BYV1 514 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
USF1-208ENST00000528768 ANGEL1Q9UNK9 670 aaKnown RBP13.76□□□□□ -0.21
USF1-208ENST00000528768 ELP1O95163 1332 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 GPAA1O43292 621 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 FIBPO43427 364 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 FGFR2P21802 821 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 MCAMP43121 646 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 SP3Q02447 781 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 ST3GAL1Q11201 340 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
USF1-208ENST00000528768 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
USF1-208ENST00000528768 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 OTUD5Q96G74 571 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
USF1-208ENST00000528768 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 PPP2R3BQ9Y5P8 575 aa13.75□□□□□ -0.21
USF1-208ENST00000528768 SYCE3A1L190 88 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 IDH1O75874 414 aaKnown RBP13.74□□□□□ -0.21
USF1-208ENST00000528768 GNAT2P19087 354 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 NAA16Q6N069 864 aaPredicted RBP13.74□□□□□ -0.21
USF1-208ENST00000528768 STOX1Q6ZVD7 989 aa13.74□□□□□ -0.21
USF1-208ENST00000528768 ANKRD18AQ8IVF6 992 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms