RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
SCN3B-205ENST00000528267 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.49■□□□□ 0.07
SCN3B-205ENST00000528267 SNCAIPQ9Y6H5 919 aa15.49■□□□□ 0.07
SCN3B-205ENST00000528267 VGLL4Q14135 290 aa15.48■□□□□ 0.07
SCN3B-205ENST00000528267 RGMBQ6NW40 437 aa15.48■□□□□ 0.07
SCN3B-205ENST00000528267 ARMC9Q7Z3E5 817 aa15.48■□□□□ 0.07
SCN3B-205ENST00000528267 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
SCN3B-205ENST00000528267 HHIPL1Q96JK4 782 aa15.48■□□□□ 0.07
SCN3B-205ENST00000528267 HELLSQ9NRZ9 838 aa15.48■□□□□ 0.07
SCN3B-205ENST00000528267 PTPRFP10586 1907 aa15.48■□□□□ 0.07
SCN3B-205ENST00000528267 LAMA4Q16363 1823 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-205ENST00000528267 TBC1D12O60347 775 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 AOC2O75106 756 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 SLC10A3P09131 477 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 GABPAQ06546 454 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 CTR9Q6PD62 1173 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 ZNF341Q9BYN7 854 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 MCM9Q9NXL9 1143 aa15.47■□□□□ 0.07
SCN3B-205ENST00000528267 GREB1LQ9C091 1923 aaPredicted RBP15.47■□□□□ 0.07
SCN3B-205ENST00000528267 CHMLP26374 656 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
SCN3B-205ENST00000528267 MCMDC2Q4G0Z9 681 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 BMP2KLQ5H9B9 411 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 DCAF15Q66K64 600 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
SCN3B-205ENST00000528267 CCDC84Q86UT8 332 aaPredicted RBP15.46■□□□□ 0.07
SCN3B-205ENST00000528267 SLC44A5Q8NCS7 719 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 DYNLL2Q96FJ2 89 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 CAPNS2Q96L46 248 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 DHX36Q9H2U1 1008 aaKnown RBP15.46■□□□□ 0.07
SCN3B-205ENST00000528267 ELP3Q9H9T3 547 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 TACC3Q9Y6A5 838 aa15.46■□□□□ 0.07
SCN3B-205ENST00000528267 WDR33Q9C0J8 1336 aaKnown RBP15.45■□□□□ 0.06
SCN3B-205ENST00000528267 USP17L12C9JPN9 530 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 USP17L21D6R901 530 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 ZNF157P51786 506 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-205ENST00000528267 MAP3K9P80192 1104 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 GRM1Q13255 1194 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 LRRFIP1Q32MZ4 808 aaKnown RBP15.45■□□□□ 0.06
SCN3B-205ENST00000528267 C12orf60Q5U649 245 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 IFNL3Q8IZI9 196 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.45■□□□□ 0.06
SCN3B-205ENST00000528267 PI4KBQ9UBF8 816 aa15.45■□□□□ 0.06
SCN3B-205ENST00000528267 CCDC171Q6TFL3 1326 aa15.44■□□□□ 0.06
SCN3B-205ENST00000528267 PATL2C9JE40 543 aaKnown RBP15.44■□□□□ 0.06
SCN3B-205ENST00000528267 SHMT1P34896 483 aa15.44■□□□□ 0.06
SCN3B-205ENST00000528267 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
SCN3B-205ENST00000528267 NOL9Q5SY16 702 aaKnown RBP15.44■□□□□ 0.06
SCN3B-205ENST00000528267 PAXIP1Q6ZW49 1069 aaPredicted RBP15.44■□□□□ 0.06
SCN3B-205ENST00000528267 WNK4Q96J92 1243 aa15.44■□□□□ 0.06
SCN3B-205ENST00000528267 EHD4Q9H223 541 aa15.44■□□□□ 0.06
SCN3B-205ENST00000528267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCN3B-205ENST00000528267 DIAPH3Q9NSV4 1193 aa15.44■□□□□ 0.06
SCN3B-205ENST00000528267 ROBO3Q96MS0 1386 aa15.44■□□□□ 0.06
SCN3B-205ENST00000528267 HLA-DOAP06340 250 aa15.43■□□□□ 0.06
SCN3B-205ENST00000528267 HSPD1P10809 573 aaKnown RBP15.43■□□□□ 0.06
SCN3B-205ENST00000528267 HERC5Q9UII4 1024 aaKnown RBP15.43■□□□□ 0.06
SCN3B-205ENST00000528267 SERPINB13Q9UIV8 391 aa15.43■□□□□ 0.06
SCN3B-205ENST00000528267 SPDYE5A6NIY4 337 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 GDF11O95390 407 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 POLR3DP05423 398 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-205ENST00000528267 GNAT2P19087 354 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 SBK1Q52WX2 424 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 SPRYD7Q5W111 196 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 TATDN1Q6P1N9 297 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 GIMAP6Q6P9H5 292 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 FOXP4Q8IVH2 680 aaPredicted RBP15.42■□□□□ 0.06
SCN3B-205ENST00000528267 NKX2-3Q8TAU0 364 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 OPTNQ96CV9 577 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
SCN3B-205ENST00000528267 UNCXA6NJT0 531 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 GUCY1A2P33402 732 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 CAP2P40123 477 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 C16orf86Q6ZW13 317 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 TTC6Q86TZ1 520 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 SCYL3Q8IZE3 742 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 JMYQ8N9B5 988 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 SLC10A4Q96EP9 437 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 ARPP21Q9UBL0 812 aaPredicted RBP15.41■□□□□ 0.06
SCN3B-205ENST00000528267 LOC285556D6RIA3 1793 aa15.41■□□□□ 0.06
SCN3B-205ENST00000528267 HIP1O00291 1037 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 SGSM2O43147 1006 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 FGAP02671 866 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 APPP05067 770 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 TDO2P48775 406 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 KIF23Q02241 960 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-205ENST00000528267 PTH1RQ03431 593 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 STK11IPQ8N1F8 1099 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 CRACR2BQ8N4Y2 399 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-205ENST00000528267 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 RAD50Q92878 1312 aa15.4■□□□□ 0.06
SCN3B-205ENST00000528267 MINDY4BA8MYZ0 360 aa15.39■□□□□ 0.05
SCN3B-205ENST00000528267 CTNND1O60716 968 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms