RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 TCP10Q12799 353 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 DZIP1Q86YF9 867 aaKnown RBP14□□□□□ -0.17
CCDC90B-210ENST00000528149 ZGPATQ8N5A5 531 aaKnown RBP14□□□□□ -0.17
CCDC90B-210ENST00000528149 BRI3BPQ8WY22 251 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 NSUN4Q96CB9 384 aaKnown RBP14□□□□□ -0.17
CCDC90B-210ENST00000528149 OPTNQ96CV9 577 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 MS4A4AQ96JQ5 239 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 ZFYVE28Q9HCC9 887 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 PAG1Q9NWQ8 432 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 FAM198AQ9UFP1 575 aa14□□□□□ -0.17
CCDC90B-210ENST00000528149 SIPA1L1O43166 1804 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 MROH7-TTC4A0A0A0MT08 1334 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 BTDP43251 543 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 DYNLL1P63167 89 aaKnown RBP13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 SH3BP5LQ7L8J4 393 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 ELP3Q9H9T3 547 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 RAI14Q9P0K7 980 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
CCDC90B-210ENST00000528149 GJA8P48165 433 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 IREB2P48200 963 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 RHBDL3P58872 404 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 LACTBP83111 547 aaPredicted RBP13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 HHIPL2Q6UWX4 724 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 ERICH6Q7L0X2 663 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 ANKRD13AQ8IZ07 590 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 NKX2-3Q8TAU0 364 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 OSBPL3Q9H4L5 887 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 LRP2BPQ9P2M1 347 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 PPP2R3BQ9Y5P8 575 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 TTC28Q96AY4 2481 aa13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 BAZ2AQ9UIF9 1905 aaKnown RBP13.98□□□□□ -0.17
CCDC90B-210ENST00000528149 MAST3O60307 1309 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 FARP2O94887 1054 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 HDLBPQ00341 1268 aaKnown RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 EVX2Q03828 476 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 PICALMQ13492 652 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 CCL15Q16663 113 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 SPTY2D1Q68D10 685 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 GPR153Q6NV75 609 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 MIGA1Q8NAN2 632 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 SH3RF3Q8TEJ3 882 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 SUGT1Q9Y2Z0 365 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 MYH1P12882 1939 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 ALPK3Q96L96 1907 aa13.97□□□□□ -0.17
CCDC90B-210ENST00000528149 TRIM6-TRIM34B2RNG4 842 aa13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 WDHD1O75717 1129 aaPredicted RBP13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 GJB1P08034 283 aa13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 MMP14P50281 582 aa13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 TTF1Q15361 905 aaPredicted RBP13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 SUPT20HL1Q3ZLR7 823 aa13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
CCDC90B-210ENST00000528149 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.18
CCDC90B-210ENST00000528149 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 MYO1BO43795 1136 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 EVI5O60447 810 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 CCL5P13501 91 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 PDE6AP16499 860 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 KIF22Q14807 665 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 MAGEB6Q8N7X4 407 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 KBTBD3Q8NAB2 608 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 DDX60LQ5H9U9 1706 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-210ENST00000528149 TLR2O60603 784 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 GNRH1P01148 92 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 CYP7A1P22680 504 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 CTGFP29279 349 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 PRMT2P55345 433 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 MAP3K12Q12852 859 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 SHROOM1Q2M3G4 852 aaPredicted RBP13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 NAA16Q6N069 864 aaPredicted RBP13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 RILPL2Q969X0 211 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 RNF208Q9H0X6 261 aa13.94□□□□□ -0.18
CCDC90B-210ENST00000528149 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 SMIM22K7EJ46 135 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 GRK4P32298 578 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 GTF2A2P52657 109 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 SLC9C2Q5TAH2 1124 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 CCDC84Q86UT8 332 aaPredicted RBP13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 EVI5LQ96CN4 794 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 MRIQ9BWK5 157 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 PRDM6Q9NQX0 595 aa13.93□□□□□ -0.18
CCDC90B-210ENST00000528149 ZNF532Q9HCE3 1301 aa13.92□□□□□ -0.18
CCDC90B-210ENST00000528149 EYSQ5T1H1 3165 aa13.92□□□□□ -0.18
CCDC90B-210ENST00000528149 MYH8P13535 1937 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms