RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GPS2Q13227 327 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 ITPK1Q13572 414 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 PIK3AP1Q6ZUJ8 805 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
USP47-207ENST00000527733 DTNBO60941 627 aa17.15■□□□□ 0.34
USP47-207ENST00000527733 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.34
USP47-207ENST00000527733 ADD1P35611 737 aaKnown RBP17.14■□□□□ 0.33
USP47-207ENST00000527733 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 ASIC1P78348 528 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 RGS12O14924 1447 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 GPR162Q16538 588 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 SIGLEC1Q9BZZ2 1709 aa17.14■□□□□ 0.33
USP47-207ENST00000527733 BRD1O95696 1058 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
USP47-207ENST00000527733 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
USP47-207ENST00000527733 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 ARGLU1Q9NWB6 273 aaPredicted RBP17.13■□□□□ 0.33
USP47-207ENST00000527733 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 CERKLQ49MI3 558 aaPredicted RBP17.13■□□□□ 0.33
USP47-207ENST00000527733 DPY19L2Q6NUT2 758 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 KIF20BQ96Q89 1820 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 MYO5BQ9ULV0 1848 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 PRKAB2O43741 272 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
USP47-207ENST00000527733 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 ADCY5O95622 1261 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 ZMYM6O95789 1325 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 PSMA7O14818 248 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
USP47-207ENST00000527733 MECOMQ03112 1051 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 EN1Q05925 392 aaPredicted RBP17.12■□□□□ 0.33
USP47-207ENST00000527733 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
USP47-207ENST00000527733 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 SEPT11Q9NVA2 429 aaKnown RBP17.12■□□□□ 0.33
USP47-207ENST00000527733 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 ADCY7P51828 1080 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 JAKMIP3Q5VZ66 844 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
USP47-207ENST00000527733 BRIP1Q9BX63 1249 aa17.12■□□□□ 0.33
USP47-207ENST00000527733 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
USP47-207ENST00000527733 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 FAM177A1Q8N128 213 aaPredicted RBP17.11■□□□□ 0.33
USP47-207ENST00000527733 VPS54Q9P1Q0 977 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 CYP2E1P05181 493 aaPredicted RBP17.11■□□□□ 0.33
USP47-207ENST00000527733 TYRO3Q06418 890 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 CETN1Q12798 172 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 DCAF15Q66K64 600 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 ELP1O95163 1332 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 PRKG1Q13976 671 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 SPAG1Q07617 926 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
USP47-207ENST00000527733 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
USP47-207ENST00000527733 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
USP47-207ENST00000527733 DDAH1O94760 285 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 GSDMDP57764 484 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
USP47-207ENST00000527733 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 CHURC1Q8WUH1 139 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 STRBPQ96SI9 672 aaKnown RBP17.1■□□□□ 0.33
USP47-207ENST00000527733 LIG1P18858 919 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 GTPBP4Q9BZE4 634 aaKnown RBP17.1■□□□□ 0.33
USP47-207ENST00000527733 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 USP17L3A6NCW0 530 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 USP17L4A6NCW7 530 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 USP17L1Q7RTZ2 530 aa17.1■□□□□ 0.33
USP47-207ENST00000527733 N4BP3O15049 544 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 RAD17O75943 681 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 CSF1RP07333 972 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 RPAP1Q9BWH6 1393 aaPredicted RBP17.09■□□□□ 0.33
USP47-207ENST00000527733 KLRF2D3W0D1 207 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 C21orf2O43822 256 aa17.09■□□□□ 0.33
USP47-207ENST00000527733 NEMFO60524 1076 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms