RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 CRELD1Q96HD1 420 aa13.14□□□□□ -0.31
CTNND1-217ENST00000527599 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
CTNND1-217ENST00000527599 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
CTNND1-217ENST00000527599 F6X3S4 739 aa13.13□□□□□ -0.31
CTNND1-217ENST00000527599 PLD6Q8N2A8 252 aaKnown RBP13.13□□□□□ -0.31
CTNND1-217ENST00000527599 PHC3Q8NDX5 983 aa13.13□□□□□ -0.31
CTNND1-217ENST00000527599 VTI1BQ9UEU0 232 aa13.13□□□□□ -0.31
CTNND1-217ENST00000527599 SLBPQ14493 270 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTNND1-217ENST00000527599 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
CTNND1-217ENST00000527599 WNT10AQ9GZT5 417 aa13.12□□□□□ -0.31
CTNND1-217ENST00000527599 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
CTNND1-217ENST00000527599 NKG7Q16617 165 aa13.11□□□□□ -0.31
CTNND1-217ENST00000527599 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
CTNND1-217ENST00000527599 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
CTNND1-217ENST00000527599 ZNF507Q8TCN5 953 aa13.11□□□□□ -0.31
CTNND1-217ENST00000527599 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
CTNND1-217ENST00000527599 OXCT1P55809 520 aa13.1□□□□□ -0.31
CTNND1-217ENST00000527599 ARMCX6Q7L4S7 300 aa13.1□□□□□ -0.31
CTNND1-217ENST00000527599 MIR1-1HGQ9H1L0 117 aa13.1□□□□□ -0.31
CTNND1-217ENST00000527599 MRS2Q9HD23 443 aa13.1□□□□□ -0.31
CTNND1-217ENST00000527599 ANGEL1Q9UNK9 670 aaKnown RBP13.1□□□□□ -0.31
CTNND1-217ENST00000527599 ABI1Q8IZP0 508 aa13.09□□□□□ -0.31
CTNND1-217ENST00000527599 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
CTNND1-217ENST00000527599 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
CTNND1-217ENST00000527599 RBAK-RBAKDNI3L0D1 243 aa13.08□□□□□ -0.32
CTNND1-217ENST00000527599 LMNB1P20700 586 aa13.08□□□□□ -0.32
CTNND1-217ENST00000527599 KCT2Q8NC54 265 aa13.08□□□□□ -0.32
CTNND1-217ENST00000527599 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.32
CTNND1-217ENST00000527599 EOMESO95936 686 aa13.07□□□□□ -0.32
CTNND1-217ENST00000527599 RLBP1P12271 317 aa13.07□□□□□ -0.32
CTNND1-217ENST00000527599 GRK4P32298 578 aa13.07□□□□□ -0.32
CTNND1-217ENST00000527599 SPRED2Q7Z698 418 aa13.07□□□□□ -0.32
CTNND1-217ENST00000527599 NETO1Q8TDF5 533 aa13.07□□□□□ -0.32
CTNND1-217ENST00000527599 JARID2Q92833 1246 aaPredicted RBP13.07□□□□□ -0.32
CTNND1-217ENST00000527599 PAK6Q9NQU5 681 aaPredicted RBP13.07□□□□□ -0.32
CTNND1-217ENST00000527599 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
CTNND1-217ENST00000527599 ZNF574Q6ZN55 896 aaPredicted RBP13.06□□□□□ -0.32
CTNND1-217ENST00000527599 KRTAP4-8Q9BYQ9 185 aa13.06□□□□□ -0.32
CTNND1-217ENST00000527599 ADGRE2Q9UHX3 823 aa13.06□□□□□ -0.32
CTNND1-217ENST00000527599 CNTNAP4Q9C0A0 1308 aa13.06□□□□□ -0.32
CTNND1-217ENST00000527599 ZBTB7CA1YPR0 619 aa13.05□□□□□ -0.32
CTNND1-217ENST00000527599 LRIG2O94898 1065 aa13.05□□□□□ -0.32
CTNND1-217ENST00000527599 SLITRK5O94991 958 aa13.05□□□□□ -0.32
CTNND1-217ENST00000527599 CAP2P40123 477 aa13.05□□□□□ -0.32
CTNND1-217ENST00000527599 BNIP3Q12983 259 aa13.05□□□□□ -0.32
CTNND1-217ENST00000527599 TSNAXIP1Q2TAA8 658 aa13.05□□□□□ -0.32
CTNND1-217ENST00000527599 BNC2Q6ZN30 1099 aaPredicted RBP13.05□□□□□ -0.32
CTNND1-217ENST00000527599 MRPL58Q14197 206 aaKnown RBP13.04□□□□□ -0.32
CTNND1-217ENST00000527599 TMCO4Q5TGY1 634 aa13.04□□□□□ -0.32
CTNND1-217ENST00000527599 FLCNQ8NFG4 579 aa13.04□□□□□ -0.32
CTNND1-217ENST00000527599 RHOVQ96L33 236 aa13.04□□□□□ -0.32
CTNND1-217ENST00000527599 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
CTNND1-217ENST00000527599 FOXQ1Q9C009 403 aa13.04□□□□□ -0.32
CTNND1-217ENST00000527599 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
CTNND1-217ENST00000527599 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
CTNND1-217ENST00000527599 PF4P02776 101 aa13.03□□□□□ -0.32
CTNND1-217ENST00000527599 CAMK2GQ13555 558 aaPredicted RBP13.03□□□□□ -0.32
CTNND1-217ENST00000527599 MCTP1Q6DN14 999 aa13.03□□□□□ -0.32
CTNND1-217ENST00000527599 HID1Q8IV36 788 aa13.03□□□□□ -0.32
CTNND1-217ENST00000527599 FAM221AA4D161 298 aa13.02□□□□□ -0.33
CTNND1-217ENST00000527599 CEACAM5P06731 702 aa13.02□□□□□ -0.33
CTNND1-217ENST00000527599 IRAK1P51617 712 aa13.02□□□□□ -0.33
CTNND1-217ENST00000527599 RPL6Q02878 288 aaKnown RBP13.02□□□□□ -0.33
CTNND1-217ENST00000527599 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
CTNND1-217ENST00000527599 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.33
CTNND1-217ENST00000527599 TACC3Q9Y6A5 838 aa13.02□□□□□ -0.33
CTNND1-217ENST00000527599 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTNND1-217ENST00000527599 ITIH2P19823 946 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 CD96P40200 585 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 LMNB2Q03252 620 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 HOMEZQ8IX15 550 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 TMEM74Q96NL1 305 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 TNKS2Q9H2K2 1166 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 TJP2Q9UDY2 1190 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 SLC5A6Q9Y289 635 aa13.01□□□□□ -0.33
CTNND1-217ENST00000527599 CILPO75339 1184 aa13□□□□□ -0.33
CTNND1-217ENST00000527599 F13A1P00488 732 aa13□□□□□ -0.33
CTNND1-217ENST00000527599 IFI16Q16666 785 aaKnown RBP13□□□□□ -0.33
CTNND1-217ENST00000527599 PRAMEF13Q5VWM6 474 aa13□□□□□ -0.33
CTNND1-217ENST00000527599 CCDC84Q86UT8 332 aaPredicted RBP13□□□□□ -0.33
CTNND1-217ENST00000527599 COPRSQ9NQ92 184 aa13□□□□□ -0.33
CTNND1-217ENST00000527599 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
CTNND1-217ENST00000527599 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
CTNND1-217ENST00000527599 GTF2IRD1Q9UHL9 959 aa12.99□□□□□ -0.33
CTNND1-217ENST00000527599 CORINQ9Y5Q5 1042 aa12.99□□□□□ -0.33
CTNND1-217ENST00000527599 CD8BP10966 210 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 TAL1P17542 331 aaPredicted RBP12.98□□□□□ -0.33
CTNND1-217ENST00000527599 GBP2P32456 591 aaPredicted RBP12.98□□□□□ -0.33
CTNND1-217ENST00000527599 NKPD1Q17RQ9 610 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 LDLRAD1Q5T700 205 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 CBLL1Q75N03 491 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 SPACA3Q8IXA5 215 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 MIPEPQ99797 713 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
CTNND1-217ENST00000527599 PGRP06401 933 aa12.97□□□□□ -0.33
CTNND1-217ENST00000527599 ZNF16P17020 682 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms