RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CD320Q9NPF0 282 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 CACNA2D2Q9NY47 1150 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 GNAT3A8MTJ3 354 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 GADD45BO75293 160 aaPredicted RBP5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 INHBBP09529 407 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 MED14OSP0DP75 135 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 ARNTP27540 789 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 PDE3BQ13370 1112 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 KCNA10Q16322 511 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 SULF2Q8IWU5 870 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 DIRC2Q96SL1 478 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 SEMA3GQ9NS98 782 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 EGFL7Q9UHF1 273 aa5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 GPN3Q9UHW5 284 aaPredicted RBP5.52□□□□□ -1.53
CLNS1A-209ENST00000527299 EIF1AYO14602 144 aaKnown RBP5.51□□□□□ -1.53
CLNS1A-209ENST00000527299 TMEM253P0C7T8 217 aa5.51□□□□□ -1.53
CLNS1A-209ENST00000527299 NPAS4Q8IUM7 802 aa5.51□□□□□ -1.53
CLNS1A-209ENST00000527299 GPBAR1Q8TDU6 330 aa5.51□□□□□ -1.53
CLNS1A-209ENST00000527299 MAPK8IP1Q9UQF2 711 aa5.51□□□□□ -1.53
CLNS1A-209ENST00000527299 GTF3C3Q9Y5Q9 886 aa5.51□□□□□ -1.53
CLNS1A-209ENST00000527299 IGHA2P01877 340 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 CTSWP56202 376 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 RING1Q06587 406 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 ZNF252P-AS1Q0IIN9 211 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 PPM1JQ5JR12 505 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 MAP1SQ66K74 1059 aaPredicted RBP5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 DTHD1Q6ZMT9 781 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 ATG14Q6ZNE5 492 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 UBE3DQ7Z6J8 389 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 HSPA12BQ96MM6 686 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 FOXQ1Q9C009 403 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 ATP13A1Q9HD20 1204 aa5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 PRDM5Q9NQX1 630 aaPredicted RBP5.5□□□□□ -1.53
CLNS1A-209ENST00000527299 NDUFB5O43674 189 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 NME2P22392 152 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 GLDCP23378 1020 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 FCGRTP55899 365 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 ARHGAP4P98171 946 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 CIAPIN1Q6FI81 312 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 C20orf173Q96LM9 149 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 CITED4Q96RK1 184 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 EMILIN2Q9BXX0 1053 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 KCNK12Q9HB15 430 aa5.49□□□□□ -1.53
CLNS1A-209ENST00000527299 FANCGO15287 622 aa5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 XRCC5P13010 732 aaKnown RBP5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 C22orf34Q6ZV56 151 aa5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 CCDC120Q96HB5 630 aa5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 EPB41L4BQ9H329 900 aa5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 DCP1AQ9NPI6 582 aaPredicted RBP5.48□□□□□ -1.53
CLNS1A-209ENST00000527299 TCAF2A6NFQ2 919 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 PRR33A8MZF0 331 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 H3BRB1 525 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 ETV2O00321 342 aaPredicted RBP5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 GPR182O15218 404 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 HOXA5P20719 270 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 ZBTB37Q5TC79 503 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 MPRIPQ6WCQ1 1025 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 NIF3L1Q9GZT8 377 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 TUT1Q9H6E5 874 aaKnown RBP5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 PPP4R2Q9NY27 417 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 SMG5Q9UPR3 1016 aaKnown RBP5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 JAG2Q9Y219 1238 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 CSADQ9Y600 493 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 CNTNAP4Q9C0A0 1308 aa5.47□□□□□ -1.53
CLNS1A-209ENST00000527299 DCDC2CA8MYV0 355 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 PPP1R15AO75807 674 aaPredicted RBP5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 LRIG2O94898 1065 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 ARMCX6Q7L4S7 300 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 C12orf40Q86WS4 652 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 GLYCTKQ8IVS8 523 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 KCT2Q8NC54 265 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 ACSBG1Q96GR2 724 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 ALPK1Q96QP1 1244 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 CSRNP1Q96S65 589 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 ST14Q9Y5Y6 855 aa5.46□□□□□ -1.54
CLNS1A-209ENST00000527299 CCDC180Q9P1Z9 1646 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 CARNS1A5YM72 827 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 H3BS24 57 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 SLITRK5O94991 958 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 SRFP11831 508 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 LINC00310P59036 64 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 SFRP5Q5T4F7 317 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 CDKAL1Q5VV42 579 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 CDC37L1Q7L3B6 337 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 THAP5Q7Z6K1 395 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 MFSD4AQ8N468 514 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 ABHD4Q8TB40 342 aa5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 ALKBH8Q96BT7 664 aaKnown RBP5.45□□□□□ -1.54
CLNS1A-209ENST00000527299 NUAK1O60285 661 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 TRIM37O94972 964 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 BMP6P22004 513 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 GRIN3AQ8TCU5 1115 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 KCNN1Q92952 543 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 SLC26A8Q96RN1 970 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 BCO2Q9BYV7 579 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 CBX8Q9HC52 389 aa5.44□□□□□ -1.54
CLNS1A-209ENST00000527299 PICK1Q9NRD5 415 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms