RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 GABPAQ06546 454 aa19.94■□□□□ 0.78
SMCO4-204ENST00000527149 DCAF15Q66K64 600 aa19.94■□□□□ 0.78
SMCO4-204ENST00000527149 ROBO3Q96MS0 1386 aa19.94■□□□□ 0.78
SMCO4-204ENST00000527149 ATAD5Q96QE3 1844 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 CYP2D7A0A087X1C5 515 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 USP17L12C9JPN9 530 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 USP17L21D6R901 530 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 SGSM2O43147 1006 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 HUNKP57058 714 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 SBK1Q52WX2 424 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 C12orf60Q5U649 245 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 CTR9Q6PD62 1173 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.93■□□□□ 0.78
SMCO4-204ENST00000527149 ARMC9Q7Z3E5 817 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 HHIPL1Q96JK4 782 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 ZNF341Q9BYN7 854 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 HERC5Q9UII4 1024 aaKnown RBP19.93■□□□□ 0.78
SMCO4-204ENST00000527149 THSD7BQ9C0I4 1608 aa19.93■□□□□ 0.78
SMCO4-204ENST00000527149 HLA-DOAP06340 250 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 HSPD1P10809 573 aaKnown RBP19.92■□□□□ 0.78
SMCO4-204ENST00000527149 TTLL12Q14166 644 aaPredicted RBP19.92■□□□□ 0.78
SMCO4-204ENST00000527149 RRP1BQ14684 758 aaKnown RBP19.92■□□□□ 0.78
SMCO4-204ENST00000527149 ALX1Q15699 326 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 IFNL3Q8IZI9 196 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 CLMNQ96JQ2 1002 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 WRNIP1Q96S55 665 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 ARPP21Q9UBL0 812 aaPredicted RBP19.92■□□□□ 0.78
SMCO4-204ENST00000527149 ABT1Q9ULW3 272 aaKnown RBP19.92■□□□□ 0.78
SMCO4-204ENST00000527149 ZMYM6O95789 1325 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 MYH8P13535 1937 aa19.92■□□□□ 0.78
SMCO4-204ENST00000527149 INPP5BP32019 993 aa19.91■□□□□ 0.78
SMCO4-204ENST00000527149 IREB2P48200 963 aaKnown RBP19.91■□□□□ 0.78
SMCO4-204ENST00000527149 TTC6Q86TZ1 520 aa19.91■□□□□ 0.78
SMCO4-204ENST00000527149 FOXP4Q8IVH2 680 aaPredicted RBP19.91■□□□□ 0.78
SMCO4-204ENST00000527149 SERPINB13Q9UIV8 391 aa19.91■□□□□ 0.78
SMCO4-204ENST00000527149 UNCXA6NJT0 531 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 CDC45O75419 566 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 POLR3DP05423 398 aaPredicted RBP19.9■□□□□ 0.78
SMCO4-204ENST00000527149 TDO2P48775 406 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 MFAP1P55081 439 aaKnown RBP19.9■□□□□ 0.78
SMCO4-204ENST00000527149 VGLL4Q14135 290 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 DDRGK1Q96HY6 314 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 ESYT1Q9BSJ8 1104 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 SNCAIPQ9Y6H5 919 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 PHIPQ8WWQ0 1821 aa19.9■□□□□ 0.78
SMCO4-204ENST00000527149 SHMT1P34896 483 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 MAP3K9P80192 1104 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 NOL9Q5SY16 702 aaKnown RBP19.89■□□□□ 0.77
SMCO4-204ENST00000527149 ANKRD13AQ8IZ07 590 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 SLC44A5Q8NCS7 719 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 RUFY2Q8WXA3 655 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 DYNLL2Q96FJ2 89 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
SMCO4-204ENST00000527149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.89■□□□□ 0.77
SMCO4-204ENST00000527149 GREB1LQ9C091 1923 aaPredicted RBP19.88■□□□□ 0.77
SMCO4-204ENST00000527149 FGAP02671 866 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 APPP05067 770 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 TATDN1Q6P1N9 297 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 C16orf86Q6ZW13 317 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 RASAL3Q86YV0 1011 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 ZKSCAN4Q969J2 545 aaPredicted RBP19.88■□□□□ 0.77
SMCO4-204ENST00000527149 DSCC1Q9BVC3 393 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 NAPBQ9H115 298 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 TAOK2Q9UL54 1235 aa19.88■□□□□ 0.77
SMCO4-204ENST00000527149 FAM155AB1AL88 458 aaPredicted RBP19.87■□□□□ 0.77
SMCO4-204ENST00000527149 JAG1P78504 1218 aa19.87■□□□□ 0.77
SMCO4-204ENST00000527149 SHROOM1Q2M3G4 852 aaPredicted RBP19.87■□□□□ 0.77
SMCO4-204ENST00000527149 RGMBQ6NW40 437 aa19.87■□□□□ 0.77
SMCO4-204ENST00000527149 CRACR2BQ8N4Y2 399 aaPredicted RBP19.87■□□□□ 0.77
SMCO4-204ENST00000527149 SLC10A3P09131 477 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 PTH1RQ03431 593 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 PPARAQ07869 468 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 DNAJC5GQ8N7S2 189 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 NBPF3Q9H094 633 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 PTPRFP10586 1907 aa19.86■□□□□ 0.77
SMCO4-204ENST00000527149 SPDYE5A6NIY4 337 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 MINDY4BA8MYZ0 360 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 CTNND1O60716 968 aaKnown RBP19.85■□□□□ 0.77
SMCO4-204ENST00000527149 GJA5P36382 358 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 CAP2P40123 477 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 CYP4F22Q6NT55 531 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 AMOTL1Q8IY63 956 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 SCYL3Q8IZE3 742 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 LSG1Q9H089 658 aaKnown RBP19.85■□□□□ 0.77
SMCO4-204ENST00000527149 ELP3Q9H9T3 547 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-204ENST00000527149 ANAPC4Q9UJX5 808 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 TACC3Q9Y6A5 838 aa19.85■□□□□ 0.77
SMCO4-204ENST00000527149 CDK8P49336 464 aa19.84■□□□□ 0.77
SMCO4-204ENST00000527149 ZNF157P51786 506 aaPredicted RBP19.84■□□□□ 0.77
SMCO4-204ENST00000527149 WNK4Q96J92 1243 aa19.84■□□□□ 0.77
SMCO4-204ENST00000527149 CAPNS2Q96L46 248 aa19.84■□□□□ 0.77
SMCO4-204ENST00000527149 SWAP70Q9UH65 585 aa19.84■□□□□ 0.77
SMCO4-204ENST00000527149 CSADQ9Y600 493 aa19.84■□□□□ 0.77
SMCO4-204ENST00000527149 VEGFBP49765 207 aa19.83■□□□□ 0.77
SMCO4-204ENST00000527149 TRIM34Q9BYJ4 488 aa19.83■□□□□ 0.77
SMCO4-204ENST00000527149 ZBTB21Q9ULJ3 1066 aa19.83■□□□□ 0.77
SMCO4-204ENST00000527149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms