RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 ANKRD7Q92527 254 aa12.44□□□□□ -0.42
PTPMT1-204ENST00000527079 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
PTPMT1-204ENST00000527079 TOMM22Q9NS69 142 aa12.44□□□□□ -0.42
PTPMT1-204ENST00000527079 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
PTPMT1-204ENST00000527079 MYH6P13533 1939 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 CYP7A1P22680 504 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 UBE4AQ14139 1066 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 DIS3L2Q8IYB7 885 aaKnown RBP12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 CCAR2Q8N163 923 aaKnown RBP12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 FANCBQ8NB91 859 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 ESR2Q92731 530 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 UBAC1Q9BSL1 405 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
PTPMT1-204ENST00000527079 BTBD18B2RXH4 712 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 MYL5Q02045 173 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 ZNF654Q8IZM8 581 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 CLIC6Q96NY7 704 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 MORC2Q9Y6X9 1032 aaPredicted RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 MAGEB6P1A0A0J9YX57 407 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 RGL2O15211 777 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 SFPQP23246 707 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 PTPREP23469 700 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 FANCCQ00597 558 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 TMC6Q7Z403 805 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
PTPMT1-204ENST00000527079 A0A0G2JS52 829 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 TOB1P50616 345 aaPredicted RBP12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 PNOCQ13519 176 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 STK11IPQ8N1F8 1099 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 BSDC1Q9NW68 430 aaPredicted RBP12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 USP27XA6NNY8 438 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 TUBB4AP04350 444 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 XBP1P17861 261 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 SEC23AQ15436 765 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 CAVIN4Q5BKX8 364 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 PDCL2Q8N4E4 241 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 HSD3B7Q9H2F3 369 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 RAI14Q9P0K7 980 aa12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 FBXO2Q9UK22 296 aaPredicted RBP12.41□□□□□ -0.42
PTPMT1-204ENST00000527079 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 ARMCX5Q6P1M9 558 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 RIOK1Q9BRS2 568 aaKnown RBP12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 ABCF2Q9UG63 623 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 KCNJ14Q9UNX9 436 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 TNKSO95271 1327 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 SEMA3EO15041 775 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 MDM2Q00987 491 aaPredicted RBP12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 NT5DC1Q5TFE4 455 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 ADGRA1Q86SQ6 560 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 KIF18AQ8NI77 898 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 NUP133Q8WUM0 1156 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 TAOK2Q9UL54 1235 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 PCDHA5Q9Y5H7 936 aa12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 SRPRBQ9Y5M8 271 aaKnown RBP12.4□□□□□ -0.42
PTPMT1-204ENST00000527079 MYH2Q9UKX2 1941 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 CCP110O43303 1012 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 UBASH3AP57075 661 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 ISM2Q6H9L7 571 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 SDR42E1Q8WUS8 393 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 RBM28Q9NW13 759 aaKnown RBP12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 SERPINC1P01008 464 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 FGRP09769 529 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 CALM1P0DP23 149 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 CALM2P0DP24 149 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 CALM3P0DP25 149 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 GYG1P46976 350 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 NCBP1Q09161 790 aaKnown RBP12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 POSTNQ15063 836 aa12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
PTPMT1-204ENST00000527079 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms