RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 RAI14Q9P0K7 980 aa23.28■■□□□ 1.32
PKP3-204ENST00000526971 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
PKP3-204ENST00000526971 ATAD5Q96QE3 1844 aa23.27■■□□□ 1.32
PKP3-204ENST00000526971 H0YGN5 161 aa23.27■■□□□ 1.32
PKP3-204ENST00000526971 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
PKP3-204ENST00000526971 ZAP70P43403 619 aa23.27■■□□□ 1.32
PKP3-204ENST00000526971 ZNF384Q8TF68 577 aa23.27■■□□□ 1.32
PKP3-204ENST00000526971 NSUN4Q96CB9 384 aaKnown RBP23.27■■□□□ 1.32
PKP3-204ENST00000526971 IDI2Q9BXS1 227 aa23.27■■□□□ 1.32
PKP3-204ENST00000526971 DDX4Q9NQI0 724 aaKnown RBP23.27■■□□□ 1.32
PKP3-204ENST00000526971 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
PKP3-204ENST00000526971 MYPNQ86TC9 1320 aa23.27■■□□□ 1.32
PKP3-204ENST00000526971 RANBP2P49792 3224 aaKnown RBP23.27■■□□□ 1.32
PKP3-204ENST00000526971 SZT2Q5T011 3432 aa23.26■■□□□ 1.31
PKP3-204ENST00000526971 FMNL1O95466 1100 aaPredicted RBP23.26■■□□□ 1.31
PKP3-204ENST00000526971 GRK4P32298 578 aa23.26■■□□□ 1.31
PKP3-204ENST00000526971 GSTO1P78417 241 aa23.26■■□□□ 1.31
PKP3-204ENST00000526971 SCYL3Q8IZE3 742 aa23.26■■□□□ 1.31
PKP3-204ENST00000526971 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
PKP3-204ENST00000526971 BCL11AQ9H165 835 aa23.26■■□□□ 1.31
PKP3-204ENST00000526971 A0A0G2JLL6 359 aaPredicted RBP23.25■■□□□ 1.31
PKP3-204ENST00000526971 DDTLA6NHG4 134 aaPredicted RBP23.25■■□□□ 1.31
PKP3-204ENST00000526971 CXCL11O14625 94 aa23.25■■□□□ 1.31
PKP3-204ENST00000526971 ENTPD3O75355 529 aa23.25■■□□□ 1.31
PKP3-204ENST00000526971 PRKCZQ05513 592 aa23.25■■□□□ 1.31
PKP3-204ENST00000526971 AAMPQ13685 434 aa23.25■■□□□ 1.31
PKP3-204ENST00000526971 PRRT2Q7Z6L0 340 aaPredicted RBP23.25■■□□□ 1.31
PKP3-204ENST00000526971 RAET1EQ8TD07 263 aa23.25■■□□□ 1.31
PKP3-204ENST00000526971 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.25■■□□□ 1.31
PKP3-204ENST00000526971 MROH7-TTC4A0A0A0MT08 1334 aa23.25■■□□□ 1.31
PKP3-204ENST00000526971 IGSF3O75054 1194 aa23.24■■□□□ 1.31
PKP3-204ENST00000526971 LDHCP07864 332 aa23.24■■□□□ 1.31
PKP3-204ENST00000526971 PTPRAP18433 802 aa23.24■■□□□ 1.31
PKP3-204ENST00000526971 PIH1D3Q9NQM4 214 aaKnown RBP23.24■■□□□ 1.31
PKP3-204ENST00000526971 GABRQQ9UN88 632 aa23.24■■□□□ 1.31
PKP3-204ENST00000526971 ZHX2Q9Y6X8 837 aa23.24■■□□□ 1.31
PKP3-204ENST00000526971 GPR75-ASB3A0A0A6YYF3 556 aa23.23■■□□□ 1.31
PKP3-204ENST00000526971 SMARCA5O60264 1052 aaPredicted RBP23.23■■□□□ 1.31
PKP3-204ENST00000526971 HOXD10P28358 340 aa23.23■■□□□ 1.31
PKP3-204ENST00000526971 BTDP43251 543 aa23.23■■□□□ 1.31
PKP3-204ENST00000526971 MAP3K10Q02779 954 aa23.23■■□□□ 1.31
PKP3-204ENST00000526971 UBE2Q1Q7Z7E8 422 aa23.23■■□□□ 1.31
PKP3-204ENST00000526971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.23■■□□□ 1.31
PKP3-204ENST00000526971 AFG3L2Q9Y4W6 797 aa23.23■■□□□ 1.31
PKP3-204ENST00000526971 LOC285556D6RIA3 1793 aa23.22■■□□□ 1.31
PKP3-204ENST00000526971 CCL5P13501 91 aa23.22■■□□□ 1.31
PKP3-204ENST00000526971 CCDC84Q86UT8 332 aaPredicted RBP23.22■■□□□ 1.31
PKP3-204ENST00000526971 GJA8P48165 433 aa23.21■■□□□ 1.31
PKP3-204ENST00000526971 FCGRTP55899 365 aa23.21■■□□□ 1.31
PKP3-204ENST00000526971 PICK1Q9NRD5 415 aa23.21■■□□□ 1.31
PKP3-204ENST00000526971 NDUFB9Q9Y6M9 179 aa23.21■■□□□ 1.31
PKP3-204ENST00000526971 SIPA1L1O43166 1804 aa23.21■■□□□ 1.31
PKP3-204ENST00000526971 ALPK3Q96L96 1907 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 GJB1P08034 283 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 RHBDL3P58872 404 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 PICALMQ13492 652 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
PKP3-204ENST00000526971 GADL1Q6ZQY3 521 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 ZSCAN29Q8IWY8 852 aaPredicted RBP23.2■■□□□ 1.3
PKP3-204ENST00000526971 EXOC6Q8TAG9 804 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 ANTXR1Q9H6X2 564 aa23.2■■□□□ 1.3
PKP3-204ENST00000526971 CDK5RAP2Q96SN8 1893 aa23.19■■□□□ 1.3
PKP3-204ENST00000526971 HDAC1Q13547 482 aaPredicted RBP23.19■■□□□ 1.3
PKP3-204ENST00000526971 RNF208Q9H0X6 261 aa23.19■■□□□ 1.3
PKP3-204ENST00000526971 FAM196BA6NMK8 535 aa23.18■■□□□ 1.3
PKP3-204ENST00000526971 IDH1O75874 414 aaKnown RBP23.18■■□□□ 1.3
PKP3-204ENST00000526971 MAP4K4O95819 1239 aaPredicted RBP23.18■■□□□ 1.3
PKP3-204ENST00000526971 ATP5JP18859 108 aa23.18■■□□□ 1.3
PKP3-204ENST00000526971 CHRDL2Q6WN34 429 aa23.18■■□□□ 1.3
PKP3-204ENST00000526971 FASTKD5Q7L8L6 764 aaKnown RBP23.18■■□□□ 1.3
PKP3-204ENST00000526971 UNC93B1Q9H1C4 597 aa23.18■■□□□ 1.3
PKP3-204ENST00000526971 MYO5AQ9Y4I1 1855 aaKnown RBP23.17■■□□□ 1.3
PKP3-204ENST00000526971 TRIM75PA6NK02 468 aa23.17■■□□□ 1.3
PKP3-204ENST00000526971 TTF1Q15361 905 aaPredicted RBP23.17■■□□□ 1.3
PKP3-204ENST00000526971 SLAIN1Q8ND83 568 aa23.17■■□□□ 1.3
PKP3-204ENST00000526971 NKX2-3Q8TAU0 364 aa23.17■■□□□ 1.3
PKP3-204ENST00000526971 BIN2Q9UBW5 565 aaPredicted RBP23.17■■□□□ 1.3
PKP3-204ENST00000526971 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
PKP3-204ENST00000526971 CTNND1O60716 968 aaKnown RBP23.16■■□□□ 1.3
PKP3-204ENST00000526971 ELNP15502 786 aa23.16■■□□□ 1.3
PKP3-204ENST00000526971 FLT3LGP49771 235 aa23.16■■□□□ 1.3
PKP3-204ENST00000526971 MAP3K12Q12852 859 aa23.16■■□□□ 1.3
PKP3-204ENST00000526971 DPF3Q92784 378 aa23.16■■□□□ 1.3
PKP3-204ENST00000526971 DNAJC2Q99543 621 aaKnown RBP23.16■■□□□ 1.3
PKP3-204ENST00000526971 NOL10Q9BSC4 688 aaKnown RBP23.16■■□□□ 1.3
PKP3-204ENST00000526971 MAST2Q6P0Q8 1798 aa23.16■■□□□ 1.3
PKP3-204ENST00000526971 BAG3O95817 575 aa23.15■■□□□ 1.3
PKP3-204ENST00000526971 PPP4CP60510 307 aa23.15■■□□□ 1.3
PKP3-204ENST00000526971 UBXN2AP68543 259 aa23.15■■□□□ 1.3
PKP3-204ENST00000526971 TREML2Q5T2D2 321 aa23.15■■□□□ 1.3
PKP3-204ENST00000526971 TMED8Q6PL24 325 aaPredicted RBP23.15■■□□□ 1.3
PKP3-204ENST00000526971 ADGRA1Q86SQ6 560 aa23.15■■□□□ 1.3
PKP3-204ENST00000526971 U2AF1L4Q8WU68 220 aaKnown RBP23.15■■□□□ 1.3
PKP3-204ENST00000526971 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
PKP3-204ENST00000526971 GOLIM4O00461 696 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 ADCY3O60266 1144 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 NPM3O75607 178 aaKnown RBP23.14■■□□□ 1.29
PKP3-204ENST00000526971 CYP7A1P22680 504 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 MAGEB6Q8N7X4 407 aa23.14■■□□□ 1.29
PKP3-204ENST00000526971 HAUS7Q99871 368 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms