RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 ADD2P35612 726 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 RHBDL3P58872 404 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 MCMDC2Q4G0Z9 681 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 ZMYM1Q5SVZ6 1142 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 SLC9C2Q5TAH2 1124 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 DCAF15Q66K64 600 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 SLF2Q8IX21 1173 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 BRI3BPQ8WY22 251 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 NSUN4Q96CB9 384 aaKnown RBP15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 ZNF341Q9BYN7 854 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 CSADQ9Y600 493 aa15.19■□□□□ 0.02
SSSCA1-203ENST00000526877 MROH7-TTC4A0A0A0MT08 1334 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 A0A0D9SFI3 127 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 EPB41L2O43491 1005 aaKnown RBP15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 INPP5BP32019 993 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 BTDP43251 543 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 MAP3K10Q02779 954 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 UBE3CQ15386 1083 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 ERO1BQ86YB8 467 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 APPBP2Q92624 585 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 C22orf23Q9BZE7 217 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 DDX4Q9NQI0 724 aaKnown RBP15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 RAI14Q9P0K7 980 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 ATRNL1Q5VV63 1379 aa15.18■□□□□ 0.02
SSSCA1-203ENST00000526877 FKTNO75072 461 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 PDE6AP16499 860 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 GTF2A2P52657 109 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 OTUD7BQ6GQQ9 843 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 TMED8Q6PL24 325 aaPredicted RBP15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 USP26Q9BXU7 913 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 ZNF532Q9HCE3 1301 aa15.17■□□□□ 0.02
SSSCA1-203ENST00000526877 DDTLA6NHG4 134 aaPredicted RBP15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 PHF20L1A8MW92 1017 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 IRF6O14896 467 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 LDHCP07864 332 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 MCCP23508 829 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 RGS19P49795 217 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 CRHR2Q13324 411 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 TBC1D32Q96NH3 1257 aa15.16■□□□□ 0.02
SSSCA1-203ENST00000526877 CCL15-CCL14A0A0B4J2E2 113 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 GSTO1P78417 241 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 PPATQ06203 517 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 PPIL2Q13356 520 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 PKN2Q16513 984 aaKnown RBP15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 CCL15Q16663 113 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 NOL9Q5SY16 702 aaKnown RBP15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 MAST2Q6P0Q8 1798 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 CCDC171Q6TFL3 1326 aa15.15■□□□□ 0.02
SSSCA1-203ENST00000526877 TCRBV5S4A2TA0A5A2 114 aa15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 CHGBP05060 677 aa15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 CYP7A1P22680 504 aa15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 SLFNL1Q499Z3 407 aa15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 OSBP2Q969R2 916 aa15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 SEC62Q99442 399 aaKnown RBP15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 LSG1Q9H089 658 aaKnown RBP15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 IL25Q9H293 177 aa15.14■□□□□ 0.01
SSSCA1-203ENST00000526877 M0R2C6 588 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 CETPP11597 493 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 RBM25P49756 843 aaKnown RBP15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 CAP1Q01518 475 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 SNAPC2Q13487 334 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 PICALMQ13492 652 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 ZNF589Q86UQ0 364 aaPredicted RBP15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 HPS5Q9UPZ3 1129 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
SSSCA1-203ENST00000526877 BTBD19C9JJ37 291 aa15.12■□□□□ 0.01
SSSCA1-203ENST00000526877 PPP4CP60510 307 aa15.12■□□□□ 0.01
SSSCA1-203ENST00000526877 MOGSQ13724 837 aa15.12■□□□□ 0.01
SSSCA1-203ENST00000526877 CCDC129Q6ZRS4 1044 aa15.12■□□□□ 0.01
SSSCA1-203ENST00000526877 ADGRA1Q86SQ6 560 aa15.12■□□□□ 0.01
SSSCA1-203ENST00000526877 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
SSSCA1-203ENST00000526877 GPAA1O43292 621 aa15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 TBC1D12O60347 775 aa15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 PTH1RQ03431 593 aa15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 TAF1CQ15572 869 aaPredicted RBP15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 FBXO46Q6PJ61 603 aaPredicted RBP15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 ZSCAN29Q8IWY8 852 aaPredicted RBP15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 SH3RF3Q8TEJ3 882 aaPredicted RBP15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 MAP4K1Q92918 833 aa15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 DSCC1Q9BVC3 393 aa15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 ZCCHC17Q9NP64 241 aaKnown RBP15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 CDK5RAP2Q96SN8 1893 aa15.11■□□□□ 0.01
SSSCA1-203ENST00000526877 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 COL2A1P02458 1487 aaPredicted RBP15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 MAGEB6P1A0A0J9YX57 407 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 PTPRAP18433 802 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 GNAT2P19087 354 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 ANP32AP39687 249 aaKnown RBP15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 SP3Q02447 781 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 OTOP1Q7RTM1 612 aa15.1■□□□□ 0.01
SSSCA1-203ENST00000526877 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms