RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 SNAP23O00161 211 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 SLC5A1P13866 664 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 CFAP100Q494V2 611 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 ZNF34Q8IZ26 560 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 INTS13Q9NVM9 706 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 FANCLQ9NW38 375 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
LINC01001-201ENST00000526704 PRKAB2O43741 272 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 MYO1BO43795 1136 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 GRIN1Q05586 938 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 MAP3K12Q12852 859 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 PTPN21Q16825 1174 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 SPECC1Q5M775 1068 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 DIS3L2Q8IYB7 885 aaKnown RBP13.4□□□□□ -0.26
LINC01001-201ENST00000526704 ELOA2Q8IYF1 753 aaPredicted RBP13.4□□□□□ -0.26
LINC01001-201ENST00000526704 LCORLQ8N3X6 602 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 KRT23Q9C075 422 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 FBXO2Q9UK22 296 aaPredicted RBP13.4□□□□□ -0.26
LINC01001-201ENST00000526704 KCNJ14Q9UNX9 436 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 CICQ96RK0 1608 aaPredicted RBP13.4□□□□□ -0.26
LINC01001-201ENST00000526704 COL4A1P02462 1669 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 RREB1Q92766 1687 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 ERVV-1B6SEH8 477 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 GOLGA8FQ08AF8 430 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 GOLGA8DPQ0D2H9 430 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 DZIP3Q86Y13 1208 aaKnown RBP13.4□□□□□ -0.26
LINC01001-201ENST00000526704 STAG1Q8WVM7 1258 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 WASF1Q92558 559 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
LINC01001-201ENST00000526704 COL14A1Q05707 1796 aaKnown RBP13.39□□□□□ -0.27
LINC01001-201ENST00000526704 TUBB4AP04350 444 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 RTN1Q16799 776 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 TMEM139Q8IV31 216 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 ZKSCAN3Q9BRR0 538 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 FANCGO15287 622 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
LINC01001-201ENST00000526704 CCP110O43303 1012 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 TOP1P11387 765 aaKnown RBP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 PTPREP23469 700 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 ETF1P62495 437 aaKnown RBP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 POSTNQ15063 836 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 RRP12Q5JTH9 1297 aaKnown RBP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 TRIM65Q6PJ69 517 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 DUOX1Q9NRD9 1551 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 TDO2P48775 406 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 WTAPQ15007 396 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01001-201ENST00000526704 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 REXO1L1PQ8IX06 675 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 TAF1P21675 1872 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
LINC01001-201ENST00000526704 H2AFXP16104 143 aaPredicted RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 FMR1Q06787 632 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 TBX2Q13207 712 aaPredicted RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 NR5A1Q13285 461 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 CMTR1Q8N1G2 835 aaKnown RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 AK7Q96M32 723 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 SERTAD1Q9UHV2 236 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 DEXIO95424 95 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 ZNF18P17022 549 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 GNAT2P19087 354 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 GABPB1Q06547 395 aaPredicted RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 HSP90AA4PQ58FG1 418 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 RILPL1Q5EBL4 403 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 FCHSD1Q86WN1 690 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
LINC01001-201ENST00000526704 TOMM22Q9NS69 142 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
LINC01001-201ENST00000526704 NPHP1O15259 732 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 SARSP49591 514 aaKnown RBP13.36□□□□□ -0.27
LINC01001-201ENST00000526704 MORC3Q14149 939 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
LINC01001-201ENST00000526704 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 GRAMD1CQ8IYS0 662 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 KRT222Q8N1A0 295 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 OXER1Q8TDS5 423 aa13.36□□□□□ -0.27
LINC01001-201ENST00000526704 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms