RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 CC2D2BQ6DHV5 1058 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 SIX5Q8N196 739 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 SH3TC2Q8TF17 1288 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 DCPSQ96C86 337 aaKnown RBP8.32□□□□□ -1.08
CSTF3-207ENST00000526480 ERO1AQ96HE7 468 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 ANKRD36CQ5JPF3 1778 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 CFAP54Q96N23 3096 aa8.32□□□□□ -1.08
CSTF3-207ENST00000526480 IGF2BP3O00425 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSTF3-207ENST00000526480 SCTRP47872 440 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 SREBF2Q12772 1141 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 DPYDQ12882 1025 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 NR5A1Q13285 461 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
CSTF3-207ENST00000526480 AEBP1Q8IUX7 1158 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 FAM200AQ8TCP9 573 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 GDF15Q99988 308 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 SLC52A2Q9HAB3 445 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 PCDHGA11Q9Y5H2 935 aa8.31□□□□□ -1.08
CSTF3-207ENST00000526480 TCF20Q9UGU0 1960 aaKnown RBP8.31□□□□□ -1.08
CSTF3-207ENST00000526480 DKK1O94907 266 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 BRD1O95696 1058 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 SMPD1P17405 629 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
CSTF3-207ENST00000526480 DDX10Q13206 875 aaKnown RBP8.3□□□□□ -1.08
CSTF3-207ENST00000526480 MTFR1Q15390 333 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 C1orf141Q5JVX7 400 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 PRAMEF18Q5VWM3 479 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 CCDC116Q8IYX3 515 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 FAM161BQ96MY7 647 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 NR2E3Q9Y5X4 410 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 MGAMO43451 1857 aa8.3□□□□□ -1.08
CSTF3-207ENST00000526480 IRS2Q9Y4H2 1338 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 PSMD14O00487 310 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 A1BGP04217 495 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 NR3C2P08235 984 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 IL6STP40189 918 aaPredicted RBP8.29□□□□□ -1.08
CSTF3-207ENST00000526480 FKBP1BP68106 108 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 CRHR2Q13324 411 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 TNIP1Q15025 636 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 LRIT3Q3SXY7 679 aa8.29□□□□□ -1.08
CSTF3-207ENST00000526480 COL2A1P02458 1487 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-207ENST00000526480 HOXA10P31260 410 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-207ENST00000526480 KIAA2012Q0VF49 1180 aa8.28□□□□□ -1.08
CSTF3-207ENST00000526480 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
CSTF3-207ENST00000526480 PPP1R26Q5T8A7 1209 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-207ENST00000526480 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
CSTF3-207ENST00000526480 MAFAQ8NHW3 353 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-207ENST00000526480 TPCN2Q8NHX9 752 aa8.28□□□□□ -1.08
CSTF3-207ENST00000526480 HTATIP2Q9BUP3 242 aa8.28□□□□□ -1.08
CSTF3-207ENST00000526480 RTFDC1Q9BY42 306 aaPredicted RBP8.28□□□□□ -1.08
CSTF3-207ENST00000526480 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
CSTF3-207ENST00000526480 COL4A1P02462 1669 aa8.27□□□□□ -1.08
CSTF3-207ENST00000526480 RTL9Q8NET4 1388 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 HEG1Q9ULI3 1381 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 STARD3NLO95772 234 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 BMP8BP34820 402 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 SEC13P55735 322 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 PTPN12Q05209 780 aaKnown RBP8.27□□□□□ -1.09
CSTF3-207ENST00000526480 AMOTQ4VCS5 1084 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 ANGEL2Q5VTE6 544 aaKnown RBP8.27□□□□□ -1.09
CSTF3-207ENST00000526480 TPTE2Q6XPS3 522 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 DPF2Q92785 391 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 PUS7Q96PZ0 661 aaKnown RBP8.27□□□□□ -1.09
CSTF3-207ENST00000526480 OSBPL3Q9H4L5 887 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 KCNQ5Q9NR82 932 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 NIP7Q9Y221 180 aaKnown RBP eCLIP8.27□□□□□ -1.09
CSTF3-207ENST00000526480 USP34Q70CQ2 3546 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 XIRP2A4UGR9 3374 aa8.27□□□□□ -1.09
CSTF3-207ENST00000526480 ECM29Q5VYK3 1845 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 PATL2C9JE40 543 aaKnown RBP8.26□□□□□ -1.09
CSTF3-207ENST00000526480 LILRA1O75019 489 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 SP3Q02447 781 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 KCNA1Q09470 495 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 NNTQ13423 1086 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 SWI5Q1ZZU3 235 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 B4GALNT3Q6L9W6 998 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
CSTF3-207ENST00000526480 HPS1Q92902 700 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
CSTF3-207ENST00000526480 ZNF496Q96IT1 587 aaPredicted RBP8.26□□□□□ -1.09
CSTF3-207ENST00000526480 VPS33BQ9H267 617 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 FZD1Q9UP38 647 aa8.26□□□□□ -1.09
CSTF3-207ENST00000526480 RBM19Q9Y4C8 960 aaKnown RBP8.26□□□□□ -1.09
CSTF3-207ENST00000526480 DDX60LQ5H9U9 1706 aaKnown RBP8.26□□□□□ -1.09
CSTF3-207ENST00000526480 SPTBN4Q9H254 2564 aa8.25□□□□□ -1.09
CSTF3-207ENST00000526480 SFI1A8K8P3 1242 aa8.25□□□□□ -1.09
CSTF3-207ENST00000526480 AXIN1O15169 862 aa8.25□□□□□ -1.09
CSTF3-207ENST00000526480 RNMTO43148 476 aaKnown RBP8.25□□□□□ -1.09
CSTF3-207ENST00000526480 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
CSTF3-207ENST00000526480 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
CSTF3-207ENST00000526480 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
CSTF3-207ENST00000526480 ZMYND8Q9ULU4 1186 aaPredicted RBP8.25□□□□□ -1.09
CSTF3-207ENST00000526480 ATP6V0A2Q9Y487 856 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms