RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
SSBP3-210ENST00000525990 PICK1Q9NRD5 415 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 ZBTB40Q9NUA8 1239 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 AFG3L2Q9Y4W6 797 aa14.76□□□□□ -0.05
SSBP3-210ENST00000525990 FLT1P17948 1338 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 A0A0G2JLL6 359 aaPredicted RBP14.75□□□□□ -0.05
SSBP3-210ENST00000525990 CTNND1O60716 968 aaKnown RBP14.75□□□□□ -0.05
SSBP3-210ENST00000525990 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
SSBP3-210ENST00000525990 IDH1O75874 414 aaKnown RBP14.75□□□□□ -0.05
SSBP3-210ENST00000525990 JAG1P78504 1218 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 C17orf99Q6UX52 265 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 GADL1Q6ZQY3 521 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 PRRT2Q7Z6L0 340 aaPredicted RBP14.75□□□□□ -0.05
SSBP3-210ENST00000525990 MIGA1Q8NAN2 632 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 DNAJC18Q9H819 358 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 DOCK3Q8IZD9 2030 aa14.75□□□□□ -0.05
SSBP3-210ENST00000525990 CXCL11O14625 94 aa14.74□□□□□ -0.05
SSBP3-210ENST00000525990 TBC1D12O60347 775 aa14.74□□□□□ -0.05
SSBP3-210ENST00000525990 CYP7A1P22680 504 aa14.74□□□□□ -0.05
SSBP3-210ENST00000525990 SAP30BPQ9UHR5 308 aaKnown RBP14.74□□□□□ -0.05
SSBP3-210ENST00000525990 PALD1Q9ULE6 856 aa14.74□□□□□ -0.05
SSBP3-210ENST00000525990 DDX19BQ9UMR2 479 aa14.74□□□□□ -0.05
SSBP3-210ENST00000525990 MYH8P13535 1937 aa14.74□□□□□ -0.05
SSBP3-210ENST00000525990 BAZ2AQ9UIF9 1905 aaKnown RBP14.74□□□□□ -0.05
SSBP3-210ENST00000525990 BRCA2P51587 3418 aa14.73□□□□□ -0.05
SSBP3-210ENST00000525990 MYCP01106 439 aaPredicted RBP14.73□□□□□ -0.05
SSBP3-210ENST00000525990 PPP4CP60510 307 aa14.73□□□□□ -0.05
SSBP3-210ENST00000525990 ERC1Q8IUD2 1116 aa14.73□□□□□ -0.05
SSBP3-210ENST00000525990 MAGEB6Q8N7X4 407 aa14.73□□□□□ -0.05
SSBP3-210ENST00000525990 EDC3Q96F86 508 aaKnown RBP14.73□□□□□ -0.05
SSBP3-210ENST00000525990 TRIM47Q96LD4 638 aa14.73□□□□□ -0.05
SSBP3-210ENST00000525990 NOL10Q9BSC4 688 aaKnown RBP14.73□□□□□ -0.05
SSBP3-210ENST00000525990 PDE4DIPQ5VU43 2346 aa14.72□□□□□ -0.05
SSBP3-210ENST00000525990 KIAA0100Q14667 2235 aaKnown RBP14.72□□□□□ -0.05
SSBP3-210ENST00000525990 BAG3O95817 575 aa14.72□□□□□ -0.05
SSBP3-210ENST00000525990 MAP4K4O95819 1239 aaPredicted RBP14.72□□□□□ -0.05
SSBP3-210ENST00000525990 MS4A1P11836 297 aa14.72□□□□□ -0.05
SSBP3-210ENST00000525990 TREML2Q5T2D2 321 aa14.72□□□□□ -0.05
SSBP3-210ENST00000525990 SH3TC2Q8TF17 1288 aa14.72□□□□□ -0.05
SSBP3-210ENST00000525990 ARMC5Q96C12 935 aa14.72□□□□□ -0.05
SSBP3-210ENST00000525990 PLXNB2O15031 1838 aa14.71□□□□□ -0.05
SSBP3-210ENST00000525990 BCRP11274 1271 aa14.71□□□□□ -0.05
SSBP3-210ENST00000525990 CAP2P40123 477 aa14.71□□□□□ -0.05
SSBP3-210ENST00000525990 PSMC4P43686 418 aa14.71□□□□□ -0.05
SSBP3-210ENST00000525990 EVX2Q03828 476 aa14.71□□□□□ -0.05
SSBP3-210ENST00000525990 SPP2Q13103 211 aa14.71□□□□□ -0.05
SSBP3-210ENST00000525990 RPAP2Q8IXW5 612 aaPredicted RBP14.71□□□□□ -0.05
SSBP3-210ENST00000525990 GDF11O95390 407 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 PLCG2P16885 1265 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 EN2P19622 333 aaPredicted RBP14.7□□□□□ -0.06
SSBP3-210ENST00000525990 OSBPP22059 807 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 SLFNL1Q499Z3 407 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 SLC9C1Q4G0N8 1177 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 KIF1BPQ96EK5 621 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 ZNF333Q96JL9 665 aa14.7□□□□□ -0.06
SSBP3-210ENST00000525990 PARK7Q99497 189 aaKnown RBP14.7□□□□□ -0.06
SSBP3-210ENST00000525990 GOLIM4O00461 696 aa14.69□□□□□ -0.06
SSBP3-210ENST00000525990 SMARCA5O60264 1052 aaPredicted RBP14.69□□□□□ -0.06
SSBP3-210ENST00000525990 CHGBP05060 677 aa14.69□□□□□ -0.06
SSBP3-210ENST00000525990 HMGCS2P54868 508 aa14.69□□□□□ -0.06
SSBP3-210ENST00000525990 KIF22Q14807 665 aa14.69□□□□□ -0.06
SSBP3-210ENST00000525990 HSP90AB4PQ58FF6 505 aa14.69□□□□□ -0.06
SSBP3-210ENST00000525990 FASTKD5Q7L8L6 764 aaKnown RBP14.69□□□□□ -0.06
SSBP3-210ENST00000525990 DNAJC2Q99543 621 aaKnown RBP14.69□□□□□ -0.06
SSBP3-210ENST00000525990 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
SSBP3-210ENST00000525990 PI4KBQ9UBF8 816 aa14.69□□□□□ -0.06
SSBP3-210ENST00000525990 HERC5Q9UII4 1024 aaKnown RBP14.69□□□□□ -0.06
SSBP3-210ENST00000525990 HMMRO75330 724 aa14.68□□□□□ -0.06
SSBP3-210ENST00000525990 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
SSBP3-210ENST00000525990 METTL16Q86W50 562 aaKnown RBP14.68□□□□□ -0.06
SSBP3-210ENST00000525990 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
SSBP3-210ENST00000525990 CRACR2BQ8N4Y2 399 aaPredicted RBP14.68□□□□□ -0.06
SSBP3-210ENST00000525990 ZNF280CQ8ND82 737 aa14.68□□□□□ -0.06
SSBP3-210ENST00000525990 RIOK1Q9BRS2 568 aaKnown RBP14.68□□□□□ -0.06
SSBP3-210ENST00000525990 SRRDQ9UH36 339 aa14.68□□□□□ -0.06
SSBP3-210ENST00000525990 GABRQQ9UN88 632 aa14.68□□□□□ -0.06
SSBP3-210ENST00000525990 AGTPBP1Q9UPW5 1226 aa14.68□□□□□ -0.06
SSBP3-210ENST00000525990 USP17L5A8MUK1 530 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 PEX10O60683 326 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
SSBP3-210ENST00000525990 PDE6AP16499 860 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 USP5P45974 858 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 PRKCZQ05513 592 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 MAP3K12Q12852 859 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 MTMR2Q13614 643 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 ARHGEF6Q15052 776 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 MTFR1Q15390 333 aa14.67□□□□□ -0.06
SSBP3-210ENST00000525990 MYPNQ86TC9 1320 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 TCRBV5S4A2TA0A5A2 114 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 PDE3AQ14432 1141 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 SLC9C2Q5TAH2 1124 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 ANKRD13CQ8N6S4 541 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 PROCA1Q8NCQ7 364 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-210ENST00000525990 SMCR8Q8TEV9 937 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-210ENST00000525990 BOLA2Q9H3K6 86 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 ZBTB21Q9ULJ3 1066 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 SLC45A1Q9Y2W3 748 aa14.66□□□□□ -0.06
SSBP3-210ENST00000525990 MKI67P46013 3256 aaKnown RBP14.65□□□□□ -0.06
SSBP3-210ENST00000525990 RAB11FIP3O75154 756 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms