RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 APPBP2Q92624 585 aa23.84■■□□□ 1.41
EXOSC4-202ENST00000525936 EVI5LQ96CN4 794 aa23.84■■□□□ 1.41
EXOSC4-202ENST00000525936 MS4A4AQ96JQ5 239 aa23.84■■□□□ 1.41
EXOSC4-202ENST00000525936 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.84■■□□□ 1.41
EXOSC4-202ENST00000525936 DCP1AQ9NPI6 582 aaPredicted RBP23.84■■□□□ 1.41
EXOSC4-202ENST00000525936 SAP30BPQ9UHR5 308 aaKnown RBP23.84■■□□□ 1.41
EXOSC4-202ENST00000525936 PDE4AP27815 886 aa23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 PPATQ06203 517 aa23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 LRRFIP1Q32MZ4 808 aaKnown RBP23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 AIDAQ96BJ3 306 aa23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 STRBPQ96SI9 672 aaKnown RBP23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 BEGAINQ9BUH8 593 aa23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 DNAJC18Q9H819 358 aa23.83■■□□□ 1.41
EXOSC4-202ENST00000525936 DDX60LQ5H9U9 1706 aaKnown RBP23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 FAM196BA6NMK8 535 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 PRKAB2O43741 272 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 SREBF2Q12772 1141 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 RRP1BQ14684 758 aaKnown RBP23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 SCYL3Q8IZE3 742 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 SDR42E1Q8WUS8 393 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 EHD4Q9H223 541 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 ATP8A2Q9NTI2 1148 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 RNF186Q9NXI6 227 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 SAGE1Q9NXZ1 904 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 MYH1P12882 1939 aa23.82■■□□□ 1.4
EXOSC4-202ENST00000525936 CTCFP49711 727 aaPredicted RBP23.81■■□□□ 1.4
EXOSC4-202ENST00000525936 PPIL2Q13356 520 aa23.81■■□□□ 1.4
EXOSC4-202ENST00000525936 OTUD5Q96G74 571 aa23.81■■□□□ 1.4
EXOSC4-202ENST00000525936 FSD1Q9BTV5 496 aa23.81■■□□□ 1.4
EXOSC4-202ENST00000525936 IRF6O14896 467 aa23.8■■□□□ 1.4
EXOSC4-202ENST00000525936 HLA-DOAP06340 250 aa23.8■■□□□ 1.4
EXOSC4-202ENST00000525936 PLCD1P51178 756 aa23.8■■□□□ 1.4
EXOSC4-202ENST00000525936 ZMYM1Q5SVZ6 1142 aa23.8■■□□□ 1.4
EXOSC4-202ENST00000525936 TTC6Q86TZ1 520 aa23.8■■□□□ 1.4
EXOSC4-202ENST00000525936 HSPA8P11142 646 aaKnown RBP23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 PTPRAP18433 802 aa23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 CAP2P40123 477 aa23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 GABPAQ06546 454 aa23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 PTPN18Q99952 460 aa23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 MCM9Q9NXL9 1143 aa23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 KCNH4Q9UQ05 1017 aa23.79■■□□□ 1.4
EXOSC4-202ENST00000525936 M0R2C6 588 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 GTF2A2P52657 109 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 TATDN1Q6P1N9 297 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 IFNL1Q8IU54 200 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 CFHR5Q9BXR6 569 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 SERPINB13Q9UIV8 391 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 SLC4A4Q9Y6R1 1079 aa23.78■■□□□ 1.4
EXOSC4-202ENST00000525936 GSG1L2A8MUP6 293 aa23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 IGF2BP3O00425 579 aaKnown RBP eCLIP23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 TRPA1O75762 1119 aa23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 SEC62Q99442 399 aaKnown RBP23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 PICK1Q9NRD5 415 aa23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 TAOK2Q9UL54 1235 aa23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 AFG3L2Q9Y4W6 797 aa23.77■■□□□ 1.4
EXOSC4-202ENST00000525936 GPAA1O43292 621 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 JAG1P78504 1218 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 SLC4A8Q2Y0W8 1093 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 GIMAP6Q6P9H5 292 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 CRACR2BQ8N4Y2 399 aaPredicted RBP23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 BRI3BPQ8WY22 251 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 ZHX2Q9Y6X8 837 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 NAV1Q8NEY1 1877 aa23.76■■□□□ 1.39
EXOSC4-202ENST00000525936 DOCK1Q14185 1865 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 CXCL11O14625 94 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 POLR3DP05423 398 aaPredicted RBP23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 GNAT2P19087 354 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 LBX1P52954 281 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 EVX2Q03828 476 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 SNAPC2Q13487 334 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 PRDM10Q9NQV6 1147 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 GINM1Q9NU53 330 aa23.75■■□□□ 1.39
EXOSC4-202ENST00000525936 ALDH1A1P00352 501 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 CENPBP07199 599 aaPredicted RBP23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 CYP2D6P10635 497 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 CETPP11597 493 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 SHMT1P34896 483 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 MOGSQ13724 837 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 C12orf60Q5U649 245 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 TSKSQ9UJT2 592 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 PHIPQ8WWQ0 1821 aa23.74■■□□□ 1.39
EXOSC4-202ENST00000525936 CCL15-CCL14A0A0B4J2E2 113 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 TRIM6-TRIM34B2RNG4 842 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 PATL2C9JE40 543 aaKnown RBP23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 USP17L12C9JPN9 530 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 USP17L21D6R901 530 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 CCL15Q16663 113 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 CTR9Q6PD62 1173 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 CENPQQ7L2Z9 268 aaPredicted RBP23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 TRIM34Q9BYJ4 488 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 HELLSQ9NRZ9 838 aa23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.73■■□□□ 1.39
EXOSC4-202ENST00000525936 BAZ2AQ9UIF9 1905 aaKnown RBP23.72■■□□□ 1.39
EXOSC4-202ENST00000525936 SBK1Q52WX2 424 aa23.72■■□□□ 1.39
EXOSC4-202ENST00000525936 EPB41L4AQ9HCS5 686 aaPredicted RBP23.72■■□□□ 1.39
EXOSC4-202ENST00000525936 SMIM22K7EJ46 135 aa23.71■■□□□ 1.39
EXOSC4-202ENST00000525936 ASNSP08243 561 aa23.71■■□□□ 1.39
EXOSC4-202ENST00000525936 SHROOM1Q2M3G4 852 aaPredicted RBP23.71■■□□□ 1.39
EXOSC4-202ENST00000525936 NOM1Q5C9Z4 860 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms