RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 PHIPQ8WWQ0 1821 aa14.4□□□□□ -0.1
CDC27-202ENST00000525495 DDX60LQ5H9U9 1706 aaKnown RBP14.39□□□□□ -0.11
CDC27-202ENST00000525495 IRF6O14896 467 aa14.39□□□□□ -0.11
CDC27-202ENST00000525495 NOL9Q5SY16 702 aaKnown RBP14.39□□□□□ -0.11
CDC27-202ENST00000525495 ATAD5Q96QE3 1844 aa14.39□□□□□ -0.11
CDC27-202ENST00000525495 TBC1D12O60347 775 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 PPATQ06203 517 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 PPIL2Q13356 520 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 TMED8Q6PL24 325 aaPredicted RBP14.38□□□□□ -0.11
CDC27-202ENST00000525495 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.38□□□□□ -0.11
CDC27-202ENST00000525495 SAP30BPQ9UHR5 308 aaKnown RBP14.38□□□□□ -0.11
CDC27-202ENST00000525495 PALD1Q9ULE6 856 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 NAV1Q8NEY1 1877 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 MAGEB6P1A0A0J9YX57 407 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 ADD2P35612 726 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 GTF2A2P52657 109 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 AAMPQ13685 434 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 RRP1BQ14684 758 aaKnown RBP14.38□□□□□ -0.11
CDC27-202ENST00000525495 CCL15Q16663 113 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 SLC4A8Q2Y0W8 1093 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 CFHR5Q9BXR6 569 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 DHX36Q9H2U1 1008 aaKnown RBP14.38□□□□□ -0.11
CDC27-202ENST00000525495 DNAJC18Q9H819 358 aa14.38□□□□□ -0.11
CDC27-202ENST00000525495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.38□□□□□ -0.111e-6■■□□□ 14.4
CDC27-202ENST00000525495 SALL3Q9BXA9 1300 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 PTPRFP10586 1907 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 IGHDP01880 384 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 USP5P45974 858 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 IRX6P78412 446 aaPredicted RBP14.37□□□□□ -0.11
CDC27-202ENST00000525495 ANKRD45Q5TZF3 282 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 CCDC84Q86UT8 332 aaPredicted RBP14.37□□□□□ -0.11
CDC27-202ENST00000525495 CERS3Q8IU89 383 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 FAM43AQ8N2R8 423 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 LCORLQ8N3X6 602 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 PI4KBQ9UBF8 816 aa14.37□□□□□ -0.11
CDC27-202ENST00000525495 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
CDC27-202ENST00000525495 ALDH1A1P00352 501 aa14.36□□□□□ -0.11
CDC27-202ENST00000525495 PTPRAP18433 802 aa14.36□□□□□ -0.11
CDC27-202ENST00000525495 METTL16Q86W50 562 aaKnown RBP14.36□□□□□ -0.11
CDC27-202ENST00000525495 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
CDC27-202ENST00000525495 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDC27-202ENST00000525495 HERC5Q9UII4 1024 aaKnown RBP14.36□□□□□ -0.11
CDC27-202ENST00000525495 KCNH4Q9UQ05 1017 aa14.36□□□□□ -0.11
CDC27-202ENST00000525495 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
CDC27-202ENST00000525495 GPR25O00155 361 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 CETPP11597 493 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 CRHR2Q13324 411 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 SNAPC2Q13487 334 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 SDR42E1Q8WUS8 393 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 ZNF296Q8WUU4 475 aaPredicted RBP14.35□□□□□ -0.11
CDC27-202ENST00000525495 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 ZHX2Q9Y6X8 837 aa14.35□□□□□ -0.11
CDC27-202ENST00000525495 BAZ2AQ9UIF9 1905 aaKnown RBP14.34□□□□□ -0.11
CDC27-202ENST00000525495 BTBD19C9JJ37 291 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 MBD4O95243 580 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 MX1P20591 662 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 JAG1P78504 1218 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 EVX2Q03828 476 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 MOGSQ13724 837 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
CDC27-202ENST00000525495 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
CDC27-202ENST00000525495 OTUD7BQ6GQQ9 843 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 SMC5Q8IY18 1101 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 AFG3L2Q9Y4W6 797 aa14.34□□□□□ -0.11
CDC27-202ENST00000525495 HAX1O00165 279 aa14.33□□□□□ -0.12
CDC27-202ENST00000525495 PRKAB2O43741 272 aa14.33□□□□□ -0.12
CDC27-202ENST00000525495 CAP2P40123 477 aa14.33□□□□□ -0.12
CDC27-202ENST00000525495 FOXP4Q8IVH2 680 aaPredicted RBP14.33□□□□□ -0.12
CDC27-202ENST00000525495 CRACR2BQ8N4Y2 399 aaPredicted RBP14.33□□□□□ -0.12
CDC27-202ENST00000525495 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
CDC27-202ENST00000525495 PUS7LQ9H0K6 701 aaKnown RBP14.33□□□□□ -0.12
CDC27-202ENST00000525495 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
CDC27-202ENST00000525495 GLRX3O76003 335 aaKnown RBP14.32□□□□□ -0.12
CDC27-202ENST00000525495 HLA-DOAP06340 250 aa14.32□□□□□ -0.12
CDC27-202ENST00000525495 PLCD1P51178 756 aa14.32□□□□□ -0.12
CDC27-202ENST00000525495 B4GALNT3Q6L9W6 998 aa14.32□□□□□ -0.12
CDC27-202ENST00000525495 LNPKQ9C0E8 428 aa14.32□□□□□ -0.12
CDC27-202ENST00000525495 MCOLN1Q9GZU1 580 aa14.32□□□□□ -0.12
CDC27-202ENST00000525495 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
CDC27-202ENST00000525495 CXCL11O14625 94 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 ERC2O15083 957 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 DGKZQ13574 1117 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
CDC27-202ENST00000525495 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
CDC27-202ENST00000525495 SERPINB13Q9UIV8 391 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 A0A0G2JLL6 359 aaPredicted RBP14.31□□□□□ -0.12
CDC27-202ENST00000525495 TRIM75PA6NK02 468 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 FKTNO75072 461 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 GDF11O95390 407 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 PDE1AP54750 535 aa14.31□□□□□ -0.12
CDC27-202ENST00000525495 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms