RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 USP40Q9NVE5 1235 aa13.94□□□□□ -0.18
CTTN-209ENST00000525276 ZNF112Q9UJU3 913 aa13.94□□□□□ -0.18
CTTN-209ENST00000525276 CDH23Q9H251 3354 aa13.94□□□□□ -0.18
CTTN-209ENST00000525276 BCRP11274 1271 aa13.93□□□□□ -0.18
CTTN-209ENST00000525276 GPAT2Q6NUI2 795 aa13.93□□□□□ -0.18
CTTN-209ENST00000525276 ANKRD23Q86SG2 305 aa13.93□□□□□ -0.18
CTTN-209ENST00000525276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
CTTN-209ENST00000525276 PIH1D3Q9NQM4 214 aaKnown RBP13.93□□□□□ -0.18
CTTN-209ENST00000525276 ALPK3Q96L96 1907 aa13.93□□□□□ -0.18
CTTN-209ENST00000525276 ATRNL1Q5VV63 1379 aa13.93□□□□□ -0.18
CTTN-209ENST00000525276 GPR75-ASB3A0A0A6YYF3 556 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 PDHXO00330 501 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
CTTN-209ENST00000525276 GJB1P08034 283 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 CCL5P13501 91 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 GRK4P32298 578 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 BTDP43251 543 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 NFIAQ12857 509 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 KIF22Q14807 665 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
CTTN-209ENST00000525276 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
CTTN-209ENST00000525276 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 MUC3AQ02505 3323 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 SOX1O00570 391 aaPredicted RBP13.91□□□□□ -0.18
CTTN-209ENST00000525276 PRKCZQ05513 592 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
CTTN-209ENST00000525276 EXOC6Q8TAG9 804 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 FAM151AQ8WW52 585 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 DPF3Q92784 378 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 HOOK2Q96ED9 719 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 NOL10Q9BSC4 688 aaKnown RBP13.91□□□□□ -0.18
CTTN-209ENST00000525276 ZNF341Q9BYN7 854 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 FAM198AQ9UFP1 575 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 GABRQQ9UN88 632 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 PTPRFP10586 1907 aa13.91□□□□□ -0.18
CTTN-209ENST00000525276 MYPNQ86TC9 1320 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 IDH1O75874 414 aaKnown RBP13.9□□□□□ -0.18
CTTN-209ENST00000525276 MAP4K4O95819 1239 aaPredicted RBP13.9□□□□□ -0.18
CTTN-209ENST00000525276 ATP5JP18859 108 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 TTF1Q15361 905 aaPredicted RBP13.9□□□□□ -0.18
CTTN-209ENST00000525276 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
CTTN-209ENST00000525276 ZFPM1Q8IX07 1006 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 GPATCH3Q96I76 525 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 UNC93B1Q9H1C4 597 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 NDUFB9Q9Y6M9 179 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
CTTN-209ENST00000525276 PHF20L1A8MW92 1017 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 ENTPD3O75355 529 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 BAG3O95817 575 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 CYP2C8P10632 490 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 RGS3P49796 1198 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 TCP10Q12799 353 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 DCAF15Q66K64 600 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
CTTN-209ENST00000525276 RAET1EQ8TD07 263 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
CTTN-209ENST00000525276 RNF208Q9H0X6 261 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 ANTXR1Q9H6X2 564 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
CTTN-209ENST00000525276 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
CTTN-209ENST00000525276 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 GOLIM4O00461 696 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 WDHD1O75717 1129 aaPredicted RBP13.88□□□□□ -0.19
CTTN-209ENST00000525276 FMNL1O95466 1100 aaPredicted RBP13.88□□□□□ -0.19
CTTN-209ENST00000525276 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 PLCG2P16885 1265 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 CYP7A1P22680 504 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 RHBDL3P58872 404 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 NKX2-3Q8TAU0 364 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 U2AF1L4Q8WU68 220 aaKnown RBP13.88□□□□□ -0.19
CTTN-209ENST00000525276 BOLA2Q9H3K6 86 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
CTTN-209ENST00000525276 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
CTTN-209ENST00000525276 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
CTTN-209ENST00000525276 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
CTTN-209ENST00000525276 PPP4CP60510 307 aa13.87□□□□□ -0.19
CTTN-209ENST00000525276 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
CTTN-209ENST00000525276 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
CTTN-209ENST00000525276 HAUS7Q99871 368 aa13.87□□□□□ -0.19
CTTN-209ENST00000525276 PAG1Q9NWQ8 432 aa13.87□□□□□ -0.19
CTTN-209ENST00000525276 AATFQ9NY61 560 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTTN-209ENST00000525276 DOCK2Q92608 1830 aa13.87□□□□□ -0.19
CTTN-209ENST00000525276 A0A0G2JLL6 359 aaPredicted RBP13.86□□□□□ -0.19
CTTN-209ENST00000525276 SGPL1O95470 568 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 ELNP15502 786 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 HOXD10P28358 340 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 PICALMQ13492 652 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 ANKRD45Q5TZF3 282 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 SH3BP5LQ7L8J4 393 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 PRRT2Q7Z6L0 340 aaPredicted RBP13.86□□□□□ -0.19
CTTN-209ENST00000525276 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 CERS3Q8IU89 383 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 ZSCAN29Q8IWY8 852 aaPredicted RBP13.86□□□□□ -0.19
CTTN-209ENST00000525276 SLAIN1Q8ND83 568 aa13.86□□□□□ -0.19
CTTN-209ENST00000525276 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
CTTN-209ENST00000525276 LRCH3Q96II8 777 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms