RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HLA-DOAP06340 250 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 IREB2P48200 963 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 VGLL4Q14135 290 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 ZYXQ15942 572 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 LRRFIP1Q32MZ4 808 aaKnown RBP5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 LDLRAD1Q5T700 205 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 FKBP1CQ5VVH2 108 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 RGMBQ6NW40 437 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 RASAL3Q86YV0 1011 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 IFNL3Q8IZI9 196 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 NKX2-3Q8TAU0 364 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 KLRG1Q96E93 195 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 SLC10A4Q96EP9 437 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 OTUD5Q96G74 571 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 CAPNS2Q96L46 248 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 TRIM34Q9BYJ4 488 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 ZNF341Q9BYN7 854 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 NAPBQ9H115 298 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 HELLSQ9NRZ9 838 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 TAF6LQ9Y6J9 622 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 ATRNL1Q5VV63 1379 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 DOCK2Q92608 1830 aa5.51□□□□□ -1.53
CHMP4A-202ENST00000524955 MYH2Q9UKX2 1941 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 RASSF10A6NK89 507 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 FAM155AB1AL88 458 aaPredicted RBP5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 GH2P01242 217 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 FGAP02671 866 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 HSPD1P10809 573 aaKnown RBP5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 CDK8P49336 464 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 MAP3K9P80192 1104 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 KIF23Q02241 960 aaPredicted RBP5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 BMP2KLQ5H9B9 411 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 RRP12Q5JTH9 1297 aaKnown RBP5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 C12orf60Q5U649 245 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 DCAF15Q66K64 600 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 TTC6Q86TZ1 520 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 ANKRD13AQ8IZ07 590 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 DNAJC5GQ8N7S2 189 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 OPTNQ96CV9 577 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 DDRGK1Q96HY6 314 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 ESYT1Q9BSJ8 1104 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 DHX36Q9H2U1 1008 aaKnown RBP5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 TOMM22Q9NS69 142 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 ATP8A2Q9NTI2 1148 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 PI4KBQ9UBF8 816 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 SERPINB13Q9UIV8 391 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 TSKSQ9UJT2 592 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 CSADQ9Y600 493 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 SNCAIPQ9Y6H5 919 aa5.5□□□□□ -1.53
CHMP4A-202ENST00000524955 WDR33Q9C0J8 1336 aaKnown RBP5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 TRIM75PA6NK02 468 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 HIP1O00291 1037 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SGSM2O43147 1006 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 CDC45O75419 566 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SLC10A3P09131 477 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 AKR1B1P15121 316 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 GNAT2P19087 354 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SHMT1P34896 483 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 CAP2P40123 477 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 FKBP1BP68106 108 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 ATP2B2Q01814 1243 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 GABPAQ06546 454 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 PPARAQ07869 468 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 COL9A3Q14050 684 aaPredicted RBP5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SEPT2Q15019 361 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 RAB3GAP1Q15042 981 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 MAP3K11Q16584 847 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SPRYD7Q5W111 196 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 TBC1D10CQ8IV04 446 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 FOXP4Q8IVH2 680 aaPredicted RBP5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 AMOTL1Q8IY63 956 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SCYL3Q8IZE3 742 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 WNK4Q96J92 1243 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 NACAP1Q9BZK3 213 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 NBPF3Q9H094 633 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 ANO2Q9NQ90 1003 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 ARPP21Q9UBL0 812 aaPredicted RBP5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 ZNF112Q9UJU3 913 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 ZHX2Q9Y6X8 837 aa5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 RPAP1Q9BWH6 1393 aaPredicted RBP5.49□□□□□ -1.53
CHMP4A-202ENST00000524955 SPDYE5A6NIY4 337 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 IRF6O14896 467 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 RAD21O60216 631 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 TBC1D12O60347 775 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 NMT2O60551 498 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 IGSF3O75054 1194 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 NPM3O75607 178 aaKnown RBP5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 PTPRAP18433 802 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 RASA1P20936 1047 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 GUCY1A2P33402 732 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 ECE1P42892 770 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 SPP2Q13103 211 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 ABCB5Q2M3G0 1257 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 CERKLQ49MI3 558 aaPredicted RBP5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 SBK1Q52WX2 424 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 TATDN1Q6P1N9 297 aa5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 SAMD1Q6SPF0 538 aaPredicted RBP5.48□□□□□ -1.53
CHMP4A-202ENST00000524955 GADL1Q6ZQY3 521 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms