RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
CASP4-204ENST00000524843 RBM28Q9NW13 759 aaKnown RBP8.68□□□□□ -1.02
CASP4-204ENST00000524843 ANKIB1Q9P2G1 1089 aa8.68□□□□□ -1.02
CASP4-204ENST00000524843 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
CASP4-204ENST00000524843 RCOR1Q9UKL0 485 aa8.68□□□□□ -1.02
CASP4-204ENST00000524843 SUGT1Q9Y2Z0 365 aa8.68□□□□□ -1.02
CASP4-204ENST00000524843 PCDHB13Q9Y5F0 798 aa8.68□□□□□ -1.02
CASP4-204ENST00000524843 A0A1W2PQ27 194 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 A0A1W2PQ64 194 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 A0A1W2PQD8 194 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 POLRMTO00411 1230 aaKnown RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 FMNL1O95466 1100 aaPredicted RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 BAG3O95817 575 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 LDHBP07195 334 aaKnown RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 COL11A2P13942 1736 aaPredicted RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 FDPSP14324 419 aaKnown RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 IARSP41252 1262 aaKnown RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 MECOMQ03112 1051 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 PDE4BQ07343 736 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 SSRP1Q08945 709 aaKnown RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 FAM182BQ5T319 152 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 CCDC73Q6ZRK6 1079 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 C10orf71Q711Q0 1435 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 NLGN1Q8N2Q7 840 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 JMYQ8N9B5 988 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 CDK5RAP2Q96SN8 1893 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 RTEL1Q9NZ71 1219 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 MYH2Q9UKX2 1941 aa8.67□□□□□ -1.02
CASP4-204ENST00000524843 IQSEC3Q9UPP2 1182 aaPredicted RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
CASP4-204ENST00000524843 MORC2Q9Y6X9 1032 aaPredicted RBP8.67□□□□□ -1.02
CASP4-204ENST00000524843 MROH7-TTC4A0A0A0MT08 1334 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 TNKSO95271 1327 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 PRKAB2O43741 272 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 UFL1O94874 794 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 TRIM37O94972 964 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 DEXIO95424 95 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 IL1R1P14778 569 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 XBP1P17861 261 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 PPP4CP60510 307 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 KIF23Q02241 960 aaPredicted RBP8.66□□□□□ -1.02
CASP4-204ENST00000524843 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 CHAF1AQ13111 956 aaPredicted RBP8.66□□□□□ -1.02
CASP4-204ENST00000524843 PDAP1Q13442 181 aaKnown RBP8.66□□□□□ -1.02
CASP4-204ENST00000524843 SAFBQ15424 915 aaKnown RBP eCLIP8.66□□□□□ -1.02
CASP4-204ENST00000524843 NTRK3Q16288 839 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 ADGRA1Q86SQ6 560 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 ZNF654Q8IZM8 581 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 HS6ST3Q8IZP7 471 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
CASP4-204ENST00000524843 RNF25Q96BH1 459 aaPredicted RBP8.66□□□□□ -1.02
CASP4-204ENST00000524843 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 ALG1Q9BT22 464 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 FUCA2Q9BTY2 467 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
CASP4-204ENST00000524843 ZNF287Q9HBT7 754 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 TOMM22Q9NS69 142 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 ZSWIM5Q9P217 1185 aa8.66□□□□□ -1.02
CASP4-204ENST00000524843 FAM205AQ6ZU69 1335 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 KINO60870 393 aaKnown RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 KLRK1P26718 216 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 PRDX5P30044 214 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 FAM160A1Q05DH4 1040 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 DDR1Q08345 913 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 STK38Q15208 465 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 SEC23AQ15436 765 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 RRP12Q5JTH9 1297 aaKnown RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 CATIPQ7Z7H3 387 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 SP8Q8IXZ3 490 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 SDR42E1Q8WUS8 393 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 MRPS27Q92552 414 aaKnown RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 USP28Q96RU2 1077 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 TNMDQ9H2S6 317 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 DCP1AQ9NPI6 582 aaPredicted RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 GPHNQ9NQX3 736 aaPredicted RBP8.65□□□□□ -1.02
CASP4-204ENST00000524843 TFCP2L1Q9NZI6 479 aa8.65□□□□□ -1.02
CASP4-204ENST00000524843 GAKO14976 1311 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 MINDY4BA8MYZ0 360 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 PPP6R2O75170 966 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 BMP15O95972 392 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 NPR1P16066 1061 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 U2AF2P26368 475 aaKnown RBP eCLIP8.64□□□□□ -1.03
CASP4-204ENST00000524843 PDE6BP35913 854 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 DYNLL1P63167 89 aaKnown RBP8.64□□□□□ -1.03
CASP4-204ENST00000524843 AKAP17AQ02040 695 aaKnown RBP8.64□□□□□ -1.03
CASP4-204ENST00000524843 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
CASP4-204ENST00000524843 IFIT1BQ5T764 474 aaKnown RBP8.64□□□□□ -1.03
CASP4-204ENST00000524843 KRT40Q6A162 431 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 ADALQ6DHV7 355 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 CTR9Q6PD62 1173 aa8.64□□□□□ -1.03
CASP4-204ENST00000524843 ILDR1Q86SU0 546 aaPredicted RBP8.64□□□□□ -1.03
CASP4-204ENST00000524843 FAM200AQ8TCP9 573 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms