RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 TTF1Q15361 905 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 BCL11AQ9H165 835 aa13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 AFG3L2Q9Y4W6 797 aa13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
TRAPPC4-204ENST00000524797 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.23
TRAPPC4-204ENST00000524797 CAP1Q01518 475 aa13.58□□□□□ -0.23
TRAPPC4-204ENST00000524797 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.23
TRAPPC4-204ENST00000524797 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.23
TRAPPC4-204ENST00000524797 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.23
TRAPPC4-204ENST00000524797 MGAMO43451 1857 aa13.58□□□□□ -0.23
TRAPPC4-204ENST00000524797 PDHXO00330 501 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 RGS19P49795 217 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 RRP1BQ14684 758 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 GPAT2Q6NUI2 795 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 YTHDC1Q96MU7 727 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 DNAJC2Q99543 621 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 PI4KBQ9UBF8 816 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 HERC5Q9UII4 1024 aaKnown RBP13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 ADGRA2Q96PE1 1338 aa13.58□□□□□ -0.24
TRAPPC4-204ENST00000524797 A0A0G2JLL6 359 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 TLR2O60603 784 aa13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 ATP5JP18859 108 aa13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 PRRT2Q7Z6L0 340 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 CCDC84Q86UT8 332 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 SAP30BPQ9UHR5 308 aaKnown RBP13.57□□□□□ -0.24
TRAPPC4-204ENST00000524797 GOLIM4O00461 696 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 PDE6AP16499 860 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 METTL16Q86W50 562 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 EFCC1Q9HA90 598 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 CAP2P40123 477 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 USP5P45974 858 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 FOXP4Q8IVH2 680 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 DNAJC18Q9H819 358 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 PTPN22Q9Y2R2 807 aa13.56□□□□□ -0.24
TRAPPC4-204ENST00000524797 MAGEB6P1A0A0J9YX57 407 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 SOX10P56693 466 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 SLC9C2Q5TAH2 1124 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 C17orf99Q6UX52 265 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 FASTKD5Q7L8L6 764 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 HAUS7Q99871 368 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 PAG1Q9NWQ8 432 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 MYH8P13535 1937 aa13.55□□□□□ -0.24
TRAPPC4-204ENST00000524797 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 TRIM75PA6NK02 468 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 HLA-DOAP06340 250 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 CPA4Q9UI42 421 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 ZNF532Q9HCE3 1301 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 BAZ2AQ9UIF9 1905 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 ARHGEF6Q15052 776 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 PARK7Q99497 189 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 SLC45A1Q9Y2W3 748 aa13.54□□□□□ -0.24
TRAPPC4-204ENST00000524797 USP17L5A8MUK1 530 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 JAG1P78504 1218 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 LACTBP83111 547 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 KIF22Q14807 665 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 SLC4A8Q2Y0W8 1093 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 CRBNQ96SW2 442 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 ARHGAP39Q9C0H5 1083 aa13.53□□□□□ -0.24
TRAPPC4-204ENST00000524797 CYP2C8P10632 490 aa13.52□□□□□ -0.24
TRAPPC4-204ENST00000524797 SPP2Q13103 211 aa13.52□□□□□ -0.24
TRAPPC4-204ENST00000524797 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.24
TRAPPC4-204ENST00000524797 GINM1Q9NU53 330 aa13.52□□□□□ -0.24
TRAPPC4-204ENST00000524797 AGTPBP1Q9UPW5 1226 aa13.52□□□□□ -0.24
TRAPPC4-204ENST00000524797 GDF11O95390 407 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 BCRP11274 1271 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 ADD2P35612 726 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 SHROOM1Q2M3G4 852 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 LCORLQ8N3X6 602 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 WDR18Q9BV38 432 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 CRNKL1Q9BZJ0 848 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 EHD4Q9H223 541 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.25
TRAPPC4-204ENST00000524797 ASNSP08243 561 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 CTGFP29279 349 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 TREML2Q5T2D2 321 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 SH3D19Q5HYK7 790 aa13.51□□□□□ -0.25
TRAPPC4-204ENST00000524797 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms