RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 PALD1Q9ULE6 856 aa12.18□□□□□ -0.46
TTC39A-213ENST00000524442 GNAT2P19087 354 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 CTCFP49711 727 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-213ENST00000524442 GTF2A2P52657 109 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 PPIL2Q13356 520 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 GIMAP6Q6P9H5 292 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 SCYL3Q8IZE3 742 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 CRACR2BQ8N4Y2 399 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-213ENST00000524442 TRIM34Q9BYJ4 488 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 DCP1AQ9NPI6 582 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-213ENST00000524442 PICK1Q9NRD5 415 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 GINM1Q9NU53 330 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
TTC39A-213ENST00000524442 AK9Q5TCS8 1911 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-213ENST00000524442 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 CHGBP05060 677 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-213ENST00000524442 CAP2P40123 477 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
TTC39A-213ENST00000524442 SLFNL1Q499Z3 407 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 ZMYM1Q5SVZ6 1142 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 OTUD7BQ6GQQ9 843 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-213ENST00000524442 AMOTL1Q8IY63 956 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 SDR42E1Q8WUS8 393 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 STRBPQ96SI9 672 aaKnown RBP12.16□□□□□ -0.46
TTC39A-213ENST00000524442 TBC1D2Q9BYX2 928 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
TTC39A-213ENST00000524442 SLC4A4Q9Y6R1 1079 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
TTC39A-213ENST00000524442 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 GPAA1O43292 621 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 PTPRAP18433 802 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 GJA5P36382 358 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 SNAPC2Q13487 334 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 ERICH6BQ5W0A0 696 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
TTC39A-213ENST00000524442 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 OTOFQ9HC10 1997 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 PCNTO95613 3336 aa12.15□□□□□ -0.46
TTC39A-213ENST00000524442 MYH7P12883 1935 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 CXCL11O14625 94 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 IRF6O14896 467 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 FOXN1O15353 648 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 PRKAB2O43741 272 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 ASNSP08243 561 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 CETPP11597 493 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 TATDN1Q6P1N9 297 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 CFHR5Q9BXR6 569 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 ZCCHC17Q9NP64 241 aaKnown RBP12.14□□□□□ -0.47
TTC39A-213ENST00000524442 HELLSQ9NRZ9 838 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
TTC39A-213ENST00000524442 CDK5RAP2Q96SN8 1893 aa12.14□□□□□ -0.47
TTC39A-213ENST00000524442 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 PATL2C9JE40 543 aaKnown RBP12.13□□□□□ -0.47
TTC39A-213ENST00000524442 HIP1O00291 1037 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 TRPA1O75762 1119 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 PDE4AP27815 886 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 PLCD1P51178 756 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 GABPAQ06546 454 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 C12orf60Q5U649 245 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 IFNL1Q8IU54 200 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 RILPL2Q969X0 211 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 PRDM10Q9NQV6 1147 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 ZHX2Q9Y6X8 837 aa12.13□□□□□ -0.47
TTC39A-213ENST00000524442 CCL15-CCL14A0A0B4J2E2 113 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 GSG1L2A8MUP6 293 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 USP17L21D6R901 530 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 M0R2C6 588 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
TTC39A-213ENST00000524442 CCL15Q16663 113 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
TTC39A-213ENST00000524442 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 BRI3BPQ8WY22 251 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 CCDC136Q96JN2 1154 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 AS3MTQ9HBK9 375 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 LAMB1P07942 1786 aa12.12□□□□□ -0.47
TTC39A-213ENST00000524442 IGF2BP3O00425 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
TTC39A-213ENST00000524442 APPP05067 770 aa12.11□□□□□ -0.47
TTC39A-213ENST00000524442 SDSP20132 328 aa12.11□□□□□ -0.47
TTC39A-213ENST00000524442 LBX1P52954 281 aa12.11□□□□□ -0.47
TTC39A-213ENST00000524442 MFAP1P55081 439 aaKnown RBP12.11□□□□□ -0.47
TTC39A-213ENST00000524442 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
TTC39A-213ENST00000524442 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms