RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 USP5P45974 858 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 KIF23Q02241 960 aaPredicted RBP14.25□□□□□ -0.13
PVT1-215ENST00000522963 MAP3K11Q16584 847 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 ANKRD13AQ8IZ07 590 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 WRNIP1Q96S55 665 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 DSCC1Q9BVC3 393 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 ELP3Q9H9T3 547 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 CDK5RAP2Q96SN8 1893 aa14.25□□□□□ -0.13
PVT1-215ENST00000522963 CEP350Q5VT06 3117 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 RPAP1Q9BWH6 1393 aaPredicted RBP14.24□□□□□ -0.13
PVT1-215ENST00000522963 OTOFQ9HC10 1997 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 APPP05067 770 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 SLURP2P0DP57 97 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 MAP2K1Q02750 393 aaPredicted RBP14.24□□□□□ -0.13
PVT1-215ENST00000522963 SLC4A8Q2Y0W8 1093 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 OSBPL5Q9H0X9 879 aaPredicted RBP14.24□□□□□ -0.13
PVT1-215ENST00000522963 DCP1AQ9NPI6 582 aaPredicted RBP14.24□□□□□ -0.13
PVT1-215ENST00000522963 ATP8A2Q9NTI2 1148 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 SAP30BPQ9UHR5 308 aaKnown RBP14.24□□□□□ -0.13
PVT1-215ENST00000522963 CSADQ9Y600 493 aa14.24□□□□□ -0.13
PVT1-215ENST00000522963 FLT1P17948 1338 aa14.23□□□□□ -0.13
PVT1-215ENST00000522963 REC8O95072 547 aa14.23□□□□□ -0.13
PVT1-215ENST00000522963 ALX1Q15699 326 aa14.23□□□□□ -0.13
PVT1-215ENST00000522963 GIMAP6Q6P9H5 292 aa14.23□□□□□ -0.13
PVT1-215ENST00000522963 MAP4K1Q92918 833 aa14.23□□□□□ -0.13
PVT1-215ENST00000522963 ZKSCAN4Q969J2 545 aaPredicted RBP14.23□□□□□ -0.13
PVT1-215ENST00000522963 MYH1P12882 1939 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 FAM196BA6NMK8 535 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
PVT1-215ENST00000522963 FGAP02671 866 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 INPP5BP32019 993 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 TDO2P48775 406 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 VGLL4Q14135 290 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 SPRYD7Q5W111 196 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.22□□□□□ -0.13
PVT1-215ENST00000522963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.22□□□□□ -0.13
PVT1-215ENST00000522963 WNK4Q96J92 1243 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 USP26Q9BXU7 913 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 NACAP1Q9BZK3 213 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 WBP1LQ9NX94 342 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 TSKSQ9UJT2 592 aa14.22□□□□□ -0.13
PVT1-215ENST00000522963 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
PVT1-215ENST00000522963 FOXN1O15353 648 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 EIF5BO60841 1220 aaKnown RBP14.21□□□□□ -0.13
PVT1-215ENST00000522963 CTR9Q6PD62 1173 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 OPTNQ96CV9 577 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 DDRGK1Q96HY6 314 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 NAPBQ9H115 298 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.21□□□□□ -0.133e-9■■■■□ 25.5
PVT1-215ENST00000522963 MCM9Q9NXL9 1143 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 PALD1Q9ULE6 856 aa14.21□□□□□ -0.13
PVT1-215ENST00000522963 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
PVT1-215ENST00000522963 FOCADQ5VW36 1801 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 ZMYM6O95789 1325 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 THSD7BQ9C0I4 1608 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 CYP2D7A0A087X1C5 515 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 USP17L12C9JPN9 530 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 USP17L21D6R901 530 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 SMIM22K7EJ46 135 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 CYP2D6P10635 497 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 EVX2Q03828 476 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 OTUD5Q96G74 571 aa14.2□□□□□ -0.14
PVT1-215ENST00000522963 UNCXA6NJT0 531 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 EPB41L2O43491 1005 aaKnown RBP14.19□□□□□ -0.14
PVT1-215ENST00000522963 POLR3DP05423 398 aaPredicted RBP14.19□□□□□ -0.14
PVT1-215ENST00000522963 HLA-DOAP06340 250 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 GJA5P36382 358 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 NECTIN1Q15223 517 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 SBK1Q52WX2 424 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 CRACR2BQ8N4Y2 399 aaPredicted RBP14.19□□□□□ -0.14
PVT1-215ENST00000522963 ARPP21Q9UBL0 812 aaPredicted RBP14.19□□□□□ -0.14
PVT1-215ENST00000522963 CTNNA3Q9UI47 895 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 SNCAIPQ9Y6H5 919 aa14.19□□□□□ -0.14
PVT1-215ENST00000522963 MINDY4BA8MYZ0 360 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 SLC27A2O14975 620 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 TRPA1O75762 1119 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 CTCFP49711 727 aaPredicted RBP14.18□□□□□ -0.14
PVT1-215ENST00000522963 PLCD1P51178 756 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 HAND2P61296 217 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 IFFO2Q5TF58 517 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 C12orf60Q5U649 245 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 CREB3L3Q68CJ9 461 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 DHX36Q9H2U1 1008 aaKnown RBP14.18□□□□□ -0.14
PVT1-215ENST00000522963 PI4KBQ9UBF8 816 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 ATRNL1Q5VV63 1379 aa14.18□□□□□ -0.14
PVT1-215ENST00000522963 NAV1Q8NEY1 1877 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
PVT1-215ENST00000522963 CYP21A2P08686 494 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
PVT1-215ENST00000522963 HSPA4P34932 840 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 LBX1P52954 281 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms