RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
VPS13B-211ENST00000522802 CST9Q5W186 159 aa8.65□□□□□ -1.02
VPS13B-211ENST00000522802 SULT6B1Q6IMI4 303 aa8.65□□□□□ -1.02
VPS13B-211ENST00000522802 COL26A1Q96A83 441 aa8.65□□□□□ -1.02
VPS13B-211ENST00000522802 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
VPS13B-211ENST00000522802 MKI67P46013 3256 aaKnown RBP8.65□□□□□ -1.03
VPS13B-211ENST00000522802 FZD9O00144 591 aa8.64□□□□□ -1.03
VPS13B-211ENST00000522802 ITGA6P23229 1130 aa8.64□□□□□ -1.03
VPS13B-211ENST00000522802 SLC51AQ86UW1 340 aa8.64□□□□□ -1.03
VPS13B-211ENST00000522802 ALDH16A1Q8IZ83 802 aa8.64□□□□□ -1.03
VPS13B-211ENST00000522802 MASTLQ96GX5 879 aa8.64□□□□□ -1.03
VPS13B-211ENST00000522802 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
VPS13B-211ENST00000522802 CUEDC1Q9NWM3 386 aaPredicted RBP8.64□□□□□ -1.03
VPS13B-211ENST00000522802 NPHP1O15259 732 aa8.63□□□□□ -1.03
VPS13B-211ENST00000522802 RNMTO43148 476 aaKnown RBP8.63□□□□□ -1.03
VPS13B-211ENST00000522802 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
VPS13B-211ENST00000522802 ST5P78524 1137 aa8.63□□□□□ -1.03
VPS13B-211ENST00000522802 AKAP4Q5JQC9 854 aa8.63□□□□□ -1.03
VPS13B-211ENST00000522802 GPC2Q8N158 579 aa8.63□□□□□ -1.03
VPS13B-211ENST00000522802 PHACTR1Q9C0D0 580 aa8.63□□□□□ -1.03
VPS13B-211ENST00000522802 CRISPLD1Q9H336 500 aa8.63□□□□□ -1.03
VPS13B-211ENST00000522802 HTTP42858 3142 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 A0A087WZG4 1122 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 EPS15P42566 896 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 DBN1Q16643 649 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 CAPN12Q6ZSI9 719 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 TRIM22Q8IYM9 498 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS13B-211ENST00000522802 GJA3Q9Y6H8 435 aa8.62□□□□□ -1.03
VPS13B-211ENST00000522802 CA12O43570 354 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 MAP2K2P36507 400 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 RIPOR1Q6ZS17 1223 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 SAPCD2Q86UD0 394 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 NANOS1Q8WY41 292 aaKnown RBP8.61□□□□□ -1.03
VPS13B-211ENST00000522802 VTI1AQ96AJ9 217 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 GMCL1Q96IK5 515 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
VPS13B-211ENST00000522802 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 RUBCNLQ9H714 662 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 GPC6Q9Y625 555 aaPredicted RBP8.61□□□□□ -1.03
VPS13B-211ENST00000522802 HEG1Q9ULI3 1381 aa8.61□□□□□ -1.03
VPS13B-211ENST00000522802 H7C1W4 665 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 STARD3NLO95772 234 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 THBS1P07996 1170 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 NPR1P16066 1061 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 IL13P35225 146 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 SCNN1AP37088 669 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
VPS13B-211ENST00000522802 RTN1Q16799 776 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 ARSJQ5FYB0 599 aaPredicted RBP8.6□□□□□ -1.03
VPS13B-211ENST00000522802 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 MYO19Q96H55 970 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 ABCC12Q96J65 1359 aa8.6□□□□□ -1.03
VPS13B-211ENST00000522802 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 CELF2O95319 508 aaKnown RBP8.59□□□□□ -1.03
VPS13B-211ENST00000522802 BRD1O95696 1058 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 A1BGP04217 495 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 IL6STP40189 918 aaPredicted RBP8.59□□□□□ -1.03
VPS13B-211ENST00000522802 LBRQ14739 615 aaKnown RBP8.59□□□□□ -1.03
VPS13B-211ENST00000522802 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 NBPF5PQ86XG9 351 aaPredicted RBP8.59□□□□□ -1.03
VPS13B-211ENST00000522802 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 SYNE4Q8N205 404 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 PGBD3Q8N328 593 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 MKNK1Q9BUB5 465 aa8.59□□□□□ -1.03
VPS13B-211ENST00000522802 GLIS2Q9BZE0 524 aaPredicted RBP8.59□□□□□ -1.03
VPS13B-211ENST00000522802 KLRG2A4D1S0 409 aaPredicted RBP8.58□□□□□ -1.04
VPS13B-211ENST00000522802 HMOX1P09601 288 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
VPS13B-211ENST00000522802 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
VPS13B-211ENST00000522802 MTHFSDQ2M296 383 aaKnown RBP8.58□□□□□ -1.04
VPS13B-211ENST00000522802 COX20Q5RI15 118 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 TTC5Q8N0Z6 440 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 RHPN1Q8TCX5 695 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
VPS13B-211ENST00000522802 PSMD1Q99460 953 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
VPS13B-211ENST00000522802 ZNF408Q9H9D4 720 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 SEPT3Q9UH03 358 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 LRFN2Q9ULH4 789 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 CENPFP49454 3210 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 LAMB4A4D0S4 1761 aa8.58□□□□□ -1.04
VPS13B-211ENST00000522802 BRCA2P51587 3418 aa8.57□□□□□ -1.04
VPS13B-211ENST00000522802 AKAP11Q9UKA4 1901 aa8.57□□□□□ -1.04
VPS13B-211ENST00000522802 EIF6P56537 245 aaKnown RBP8.57□□□□□ -1.04
VPS13B-211ENST00000522802 NAA30Q147X3 362 aaPredicted RBP8.57□□□□□ -1.04
VPS13B-211ENST00000522802 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
VPS13B-211ENST00000522802 USP50Q70EL3 339 aaPredicted RBP8.57□□□□□ -1.04
VPS13B-211ENST00000522802 VWA5B2Q8N398 1253 aa8.57□□□□□ -1.04
VPS13B-211ENST00000522802 JDP2Q8WYK2 163 aa8.57□□□□□ -1.04
VPS13B-211ENST00000522802 SAP130Q9H0E3 1048 aa8.57□□□□□ -1.04
VPS13B-211ENST00000522802 RIC1Q4ADV7 1423 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 EFHC2Q5JST6 749 aa8.56□□□□□ -1.04
VPS13B-211ENST00000522802 C16orf46Q6P387 395 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms