RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PSMD7P51665 324 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PHEXP78562 749 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 ARHGEF6Q15052 776 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 E4F1Q66K89 784 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 CYB5D1Q6P9G0 228 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 ATF7IPQ6VMQ6 1270 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 CTNNBL1Q8WYA6 563 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 EPC1Q9H2F5 836 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 TAOK3Q9H2K8 898 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 GDPD2Q9HCC8 539 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 TUBA8Q9NY65 449 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 RAB21Q9UL25 225 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PARP3Q9Y6F1 533 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 A0A1B0GVG6 124 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 LINC00854A0A1B0GVQ3 168 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 SMIM24O75264 130 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PRPF6O94906 941 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 ALOX15P16050 662 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 AARSP49588 968 aaKnown RBP eCLIP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 IRAK1P51617 712 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 NUCB1Q02818 461 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 DMPKQ09013 629 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 BLMHQ13867 455 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 ALDH1L2Q3SY69 923 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PABPC1LQ4VXU2 614 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 CCDC146Q8IYE0 955 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 BCAS4Q8TDM0 211 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 INTS4Q96HW7 963 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 IWS1Q96ST2 819 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 NAT10Q9H0A0 1025 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 CBX8Q9HC52 389 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PCDH18Q9HCL0 1135 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 LUC7LQ9NQ29 371 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 CFAP45Q9UL16 551 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 PAIP2BQ9ULR5 123 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
HMGB4-204ENST00000522796 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 ABCC2Q92887 1545 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 RTL1A6NKG5 1358 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 GOLGA6L7A0A1B0GV03 622 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 SPTLC2O15270 562 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 URI1O94763 535 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 ERCC5P28715 1186 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 CCBE1Q6UXH8 406 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 VIPAS39Q9H9C1 493 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 PRELID1Q9Y255 219 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 SLC45A1Q9Y2W3 748 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 CDHR2Q9BYE9 1310 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 SBNO2Q9Y2G9 1366 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 FGD6Q6ZV73 1430 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 GCC2Q8IWJ2 1684 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 BIN1O00499 593 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 ATP4AP20648 1035 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 MCM3P25205 808 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 AMPHP49418 695 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 GNAQP50148 359 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 NEK2P51955 445 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 TYRO3Q06418 890 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 MVPQ14764 893 aaKnown RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 SKIDA1Q1XH10 827 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 CCDC152Q4G0S7 254 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 NDUFAF2Q8N183 169 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 ZBTB8BQ8NAP8 495 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 ANKRD24Q8TF21 1146 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 NSMCE1Q8WV22 266 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 TNMDQ9H2S6 317 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 ZNHIT6Q9NWK9 470 aaKnown RBP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 GALNT8Q9NY28 637 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 AATFQ9NY61 560 aaKnown RBP eCLIP9.3□□□□□ -0.92
HMGB4-204ENST00000522796 CROTQ9UKG9 612 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 SSX2IPQ9Y2D8 614 aa9.3□□□□□ -0.92
HMGB4-204ENST00000522796 A6NNZ2 444 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 TBKBP1A7MCY6 615 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 TMEM232C9JQI7 657 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 EIF3HO15372 352 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CDC45O75419 566 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 LUC7L3O95232 432 aaKnown RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 LDHCP07864 332 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 IDO1P14902 403 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 TUBB4BP68371 445 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 PPP2R3AQ06190 1150 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CASP8Q14790 479 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 RABL6Q3YEC7 729 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 TUBB8Q3ZCM7 444 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 IQCEQ6IPM2 695 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 NANOGNBQ7Z5D8 188 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 PCGF5Q86SE9 256 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 CDK5RAP3Q96JB5 506 aa9.29□□□□□ -0.92
HMGB4-204ENST00000522796 UBE2OQ9C0C9 1292 aaKnown RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 PDGFDQ9GZP0 370 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 ACTR5Q9H9F9 607 aaPredicted RBP9.29□□□□□ -0.92
HMGB4-204ENST00000522796 ZNF304Q9HCX3 659 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms