RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 GPAT2Q6NUI2 795 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 KRT26Q7Z3Y9 468 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 VWA5B2Q8N398 1253 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 CHMP4AQ9BY43 222 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 MINPP1Q9UNW1 487 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 CDHR2Q9BYE9 1310 aa10.26□□□□□ -0.77
PVT1-213ENST00000522414 POLR2AP24928 1970 aaKnown RBP10.25□□□□□ -0.77
PVT1-213ENST00000522414 VAMP4O75379 141 aa10.25□□□□□ -0.77
PVT1-213ENST00000522414 RPS12P25398 132 aaKnown RBP10.25□□□□□ -0.77
PVT1-213ENST00000522414 MAP2K2P36507 400 aa10.25□□□□□ -0.77
PVT1-213ENST00000522414 NEXNQ0ZGT2 675 aa10.25□□□□□ -0.77
PVT1-213ENST00000522414 UBE3BQ7Z3V4 1068 aa10.25□□□□□ -0.77
PVT1-213ENST00000522414 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
PVT1-213ENST00000522414 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
PVT1-213ENST00000522414 SCAF8Q9UPN6 1271 aaKnown RBP10.25□□□□□ -0.77
PVT1-213ENST00000522414 PSME4Q14997 1843 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 ITGA6P23229 1130 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 ATP2B4P23634 1241 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 HUNKP57058 714 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 EXOSC9Q06265 439 aaKnown RBP10.24□□□□□ -0.77
PVT1-213ENST00000522414 FLIIQ13045 1269 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 GCKRQ14397 625 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 TXNRD3Q86VQ6 643 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 CDC5LQ99459 802 aaKnown RBP10.24□□□□□ -0.77
PVT1-213ENST00000522414 BSDC1Q9NW68 430 aaPredicted RBP10.24□□□□□ -0.77
PVT1-213ENST00000522414 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
PVT1-213ENST00000522414 XDHP47989 1333 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 ZNF609O15014 1411 aa10.24□□□□□ -0.77
PVT1-213ENST00000522414 TRPM7Q96QT4 1865 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 MYH3P11055 1940 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 USP17L3A6NCW0 530 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 F6X3S4 739 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 ANP32CO43423 234 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 LILRB3O75022 631 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 USP17L8P0C7I0 530 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 ZNF280AP59817 542 aaPredicted RBP10.23□□□□□ -0.77
PVT1-213ENST00000522414 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
PVT1-213ENST00000522414 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 ANGEL2Q5VTE6 544 aaKnown RBP10.23□□□□□ -0.77
PVT1-213ENST00000522414 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 WDR63Q8IWG1 891 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 GMLQ99445 158 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 IL16Q14005 1332 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 FANCIQ9NVI1 1328 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 SCN9AQ15858 1988 aa10.23□□□□□ -0.77
PVT1-213ENST00000522414 ZNF646O15015 1829 aaPredicted RBP10.22□□□□□ -0.77
PVT1-213ENST00000522414 SNAP23O00161 211 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 CSF1RP07333 972 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 KLRK1P26718 216 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 CTSOP43234 321 aaPredicted RBP10.22□□□□□ -0.77
PVT1-213ENST00000522414 CCT4P50991 539 aaKnown RBP10.22□□□□□ -0.77
PVT1-213ENST00000522414 CASP7P55210 303 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 PRAMEF18Q5VWM3 479 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 PODNQ7Z5L7 613 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 FAM9BQ8IZU0 186 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 C2orf69Q8N8R5 385 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 AGBL3Q8NEM8 1001 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 DNAAF4Q8WXU2 420 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 HHIPL1Q96JK4 782 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 GBA2Q9HCG7 927 aaPredicted RBP10.22□□□□□ -0.77
PVT1-213ENST00000522414 GGA3Q9NZ52 723 aa10.22□□□□□ -0.77
PVT1-213ENST00000522414 FAM155AB1AL88 458 aaPredicted RBP10.21□□□□□ -0.77
PVT1-213ENST00000522414 TRIM66O15016 1216 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 ZNF157P51786 506 aaPredicted RBP10.21□□□□□ -0.77
PVT1-213ENST00000522414 NBPF9Q3BBW0 867 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 DACT2Q5SW24 774 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 RGMBQ6NW40 437 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
PVT1-213ENST00000522414 LINS1Q8NG48 757 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 CDCA5Q96FF9 252 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 ABHD8Q96I13 439 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 MYOZ2Q9NPC6 264 aa10.21□□□□□ -0.77
PVT1-213ENST00000522414 ZNF804BA4D1E1 1349 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 CDC14CA4D256 554 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 TAF5LO75529 589 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
PVT1-213ENST00000522414 IGHMBP2P38935 993 aaKnown RBP10.2□□□□□ -0.78
PVT1-213ENST00000522414 BRPF1P55201 1214 aaPredicted RBP10.2□□□□□ -0.78
PVT1-213ENST00000522414 FOXO4P98177 505 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 KIF23Q02241 960 aaPredicted RBP10.2□□□□□ -0.78
PVT1-213ENST00000522414 MOB2Q70IA6 237 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 MPHOSPH8Q99549 860 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 PLA2G12BQ9BX93 195 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 LEMD3Q9Y2U8 911 aa10.2□□□□□ -0.78
PVT1-213ENST00000522414 CHRNDQ07001 517 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 NOGQ13253 232 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 EPHA10Q5JZY3 1008 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 BEND3Q5T5X7 828 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 TTLL5Q6EMB2 1281 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 SV2AQ7L0J3 742 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 ZNF594Q96JF6 807 aaPredicted RBP10.19□□□□□ -0.78
PVT1-213ENST00000522414 COA1Q9GZY4 146 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 MYH16Q9H6N6 1097 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 PGPEP1Q9NXJ5 209 aa10.19□□□□□ -0.78
PVT1-213ENST00000522414 ANKRD18BA2A2Z9 1011 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 CCDC85CA6NKD9 419 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms