RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MAPKAPK5Q8IW41 473 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 SIRT2Q8IXJ6 389 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 RPAP2Q8IXW5 612 aaPredicted RBP25.29■■□□□ 1.64
SDCBP-209ENST00000522243 ANTXR1Q9H6X2 564 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 PTCH2Q9Y6C5 1203 aa25.29■■□□□ 1.64
SDCBP-209ENST00000522243 SIPA1L1O43166 1804 aa25.28■■□□□ 1.64
SDCBP-209ENST00000522243 TRIM75PA6NK02 468 aa25.28■■□□□ 1.64
SDCBP-209ENST00000522243 CYP2C8P10632 490 aa25.28■■□□□ 1.64
SDCBP-209ENST00000522243 ADGRA2Q96PE1 1338 aa25.28■■□□□ 1.64
SDCBP-209ENST00000522243 FOCADQ5VW36 1801 aa25.28■■□□□ 1.64
SDCBP-209ENST00000522243 RRP1BQ14684 758 aaKnown RBP25.27■■□□□ 1.64
SDCBP-209ENST00000522243 FASTKD5Q7L8L6 764 aaKnown RBP25.27■■□□□ 1.64
SDCBP-209ENST00000522243 POTEFA5A3E0 1075 aa25.26■■□□□ 1.63
SDCBP-209ENST00000522243 CTGFP29279 349 aa25.26■■□□□ 1.63
SDCBP-209ENST00000522243 C20orf194Q5TEA3 1177 aa25.26■■□□□ 1.63
SDCBP-209ENST00000522243 MAGEB6Q8N7X4 407 aa25.26■■□□□ 1.63
SDCBP-209ENST00000522243 PARK7Q99497 189 aaKnown RBP25.26■■□□□ 1.63
SDCBP-209ENST00000522243 HMMRO75330 724 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 MIGA1Q8NAN2 632 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 ARMC5Q96C12 935 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 KIF1BPQ96EK5 621 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 PI4KBQ9UBF8 816 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 SAP30BPQ9UHR5 308 aaKnown RBP25.25■■□□□ 1.63
SDCBP-209ENST00000522243 PALD1Q9ULE6 856 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 FLT1P17948 1338 aa25.25■■□□□ 1.63
SDCBP-209ENST00000522243 CAP2P40123 477 aa25.24■■□□□ 1.63
SDCBP-209ENST00000522243 PSMC4P43686 418 aa25.24■■□□□ 1.63
SDCBP-209ENST00000522243 SLC4A8Q2Y0W8 1093 aa25.24■■□□□ 1.63
SDCBP-209ENST00000522243 CLASRPQ8N2M8 674 aaKnown RBP25.24■■□□□ 1.63
SDCBP-209ENST00000522243 DHX36Q9H2U1 1008 aaKnown RBP25.24■■□□□ 1.63
SDCBP-209ENST00000522243 IGSF3O75054 1194 aa25.23■■□□□ 1.63
SDCBP-209ENST00000522243 SPP2Q13103 211 aa25.23■■□□□ 1.63
SDCBP-209ENST00000522243 SLC9C1Q4G0N8 1177 aa25.23■■□□□ 1.63
SDCBP-209ENST00000522243 HERC5Q9UII4 1024 aaKnown RBP25.23■■□□□ 1.63
SDCBP-209ENST00000522243 MYCP01106 439 aaPredicted RBP25.22■■□□□ 1.63
SDCBP-209ENST00000522243 MAP3K12Q12852 859 aa25.22■■□□□ 1.63
SDCBP-209ENST00000522243 CHMP4BQ9H444 224 aaKnown RBP25.22■■□□□ 1.63
SDCBP-209ENST00000522243 MYH1P12882 1939 aa25.22■■□□□ 1.63
SDCBP-209ENST00000522243 FMNL1O95466 1100 aaPredicted RBP25.21■■□□□ 1.63
SDCBP-209ENST00000522243 IFIT2P09913 472 aaKnown RBP25.21■■□□□ 1.63
SDCBP-209ENST00000522243 BCRP11274 1271 aa25.21■■□□□ 1.63
SDCBP-209ENST00000522243 CRACR2BQ8N4Y2 399 aaPredicted RBP25.21■■□□□ 1.63
SDCBP-209ENST00000522243 TRIM47Q96LD4 638 aa25.21■■□□□ 1.63
SDCBP-209ENST00000522243 DNAJC18Q9H819 358 aa25.21■■□□□ 1.63
SDCBP-209ENST00000522243 MGAMO43451 1857 aa25.2■■□□□ 1.62
SDCBP-209ENST00000522243 TREML2Q5T2D2 321 aa25.2■■□□□ 1.62
SDCBP-209ENST00000522243 FOXP4Q8IVH2 680 aaPredicted RBP25.2■■□□□ 1.62
SDCBP-209ENST00000522243 ZNF280CQ8ND82 737 aa25.2■■□□□ 1.62
SDCBP-209ENST00000522243 SH3TC2Q8TF17 1288 aa25.2■■□□□ 1.62
SDCBP-209ENST00000522243 ZNF333Q96JL9 665 aa25.2■■□□□ 1.62
SDCBP-209ENST00000522243 TRIM34Q9BYJ4 488 aa25.2■■□□□ 1.62
SDCBP-209ENST00000522243 RBBP6Q7Z6E9 1792 aaKnown RBP25.2■■□□□ 1.62
SDCBP-209ENST00000522243 USP17L5A8MUK1 530 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 RAB11FIP3O75154 756 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 GNRH1P01148 92 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 OSBPP22059 807 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 USP5P45974 858 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 JAG1P78504 1218 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 NBPF11Q86T75 865 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 AGTPBP1Q9UPW5 1226 aa25.19■■□□□ 1.62
SDCBP-209ENST00000522243 HMGCS2P54868 508 aa25.18■■□□□ 1.62
SDCBP-209ENST00000522243 PDE3AQ14432 1141 aa25.18■■□□□ 1.62
SDCBP-209ENST00000522243 SHROOM1Q2M3G4 852 aaPredicted RBP25.18■■□□□ 1.62
SDCBP-209ENST00000522243 SMCR8Q8TEV9 937 aaPredicted RBP25.18■■□□□ 1.62
SDCBP-209ENST00000522243 DNAJC2Q99543 621 aaKnown RBP25.18■■□□□ 1.62
SDCBP-209ENST00000522243 TMEM106CQ9BVX2 250 aa25.18■■□□□ 1.62
SDCBP-209ENST00000522243 SRRDQ9UH36 339 aa25.18■■□□□ 1.62
SDCBP-209ENST00000522243 SLC45A1Q9Y2W3 748 aa25.18■■□□□ 1.62
SDCBP-209ENST00000522243 GDF11O95390 407 aa25.17■■□□□ 1.62
SDCBP-209ENST00000522243 HLA-DOAP06340 250 aa25.17■■□□□ 1.62
SDCBP-209ENST00000522243 EN2P19622 333 aaPredicted RBP25.17■■□□□ 1.62
SDCBP-209ENST00000522243 PRMT2P55345 433 aa25.17■■□□□ 1.62
SDCBP-209ENST00000522243 AS3MTQ9HBK9 375 aa25.17■■□□□ 1.62
SDCBP-209ENST00000522243 LOC285556D6RIA3 1793 aa25.17■■□□□ 1.62
SDCBP-209ENST00000522243 MYPNQ86TC9 1320 aa25.16■■□□□ 1.62
SDCBP-209ENST00000522243 GOLIM4O00461 696 aa25.16■■□□□ 1.62
SDCBP-209ENST00000522243 HOXD10P28358 340 aa25.16■■□□□ 1.62
SDCBP-209ENST00000522243 TTF1Q15361 905 aaPredicted RBP25.16■■□□□ 1.62
SDCBP-209ENST00000522243 METTL16Q86W50 562 aaKnown RBP25.16■■□□□ 1.62
SDCBP-209ENST00000522243 EDC3Q96F86 508 aaKnown RBP25.16■■□□□ 1.62
SDCBP-209ENST00000522243 TBC1D2Q9BYX2 928 aa25.16■■□□□ 1.62
SDCBP-209ENST00000522243 FCGRTP55899 365 aa25.15■■□□□ 1.62
SDCBP-209ENST00000522243 CERS3Q8IU89 383 aa25.15■■□□□ 1.62
SDCBP-209ENST00000522243 PROCA1Q8NCQ7 364 aaPredicted RBP25.15■■□□□ 1.62
SDCBP-209ENST00000522243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.15■■□□□ 1.62
SDCBP-209ENST00000522243 ASNSP08243 561 aa25.14■■□□□ 1.62
SDCBP-209ENST00000522243 SLC9C2Q5TAH2 1124 aa25.14■■□□□ 1.62
SDCBP-209ENST00000522243 ANKRD13CQ8N6S4 541 aa25.14■■□□□ 1.62
SDCBP-209ENST00000522243 RAET1EQ8TD07 263 aa25.14■■□□□ 1.62
SDCBP-209ENST00000522243 RIOK1Q9BRS2 568 aaKnown RBP25.14■■□□□ 1.62
SDCBP-209ENST00000522243 BOLA2Q9H3K6 86 aa25.14■■□□□ 1.62
SDCBP-209ENST00000522243 MAGEB6P1A0A0J9YX57 407 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 PDE6AP16499 860 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 PRKCZQ05513 592 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 MTMR2Q13614 643 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 SH3D19Q5HYK7 790 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 PNMA3Q9UL41 463 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 GABRQQ9UN88 632 aa25.13■■□□□ 1.61
SDCBP-209ENST00000522243 TNRC18O15417 2968 aaPredicted RBP25.13■■□□□ 1.61
SDCBP-209ENST00000522243 ZNF532Q9HCE3 1301 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms