RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
MRPS28-208ENST00000521605 CAPN2P17655 700 aa13.19□□□□□ -0.3
MRPS28-208ENST00000521605 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
MRPS28-208ENST00000521605 TTC22Q5TAA0 569 aa13.19□□□□□ -0.3
MRPS28-208ENST00000521605 FAM83AQ86UY5 434 aa13.19□□□□□ -0.3
MRPS28-208ENST00000521605 KIF1BPQ96EK5 621 aa13.19□□□□□ -0.3
MRPS28-208ENST00000521605 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
MRPS28-208ENST00000521605 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
MRPS28-208ENST00000521605 SRGAP3O43295 1099 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-208ENST00000521605 FOXO4P98177 505 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 TCP10Q12799 353 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 IRF5Q13568 498 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 RABL6Q3YEC7 729 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-208ENST00000521605 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 ANKLE1Q8NAG6 615 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-208ENST00000521605 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
MRPS28-208ENST00000521605 LAMA2P24043 3122 aaKnown RBP13.17□□□□□ -0.3
MRPS28-208ENST00000521605 COL9A1P20849 921 aa13.17□□□□□ -0.3
MRPS28-208ENST00000521605 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
MRPS28-208ENST00000521605 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
MRPS28-208ENST00000521605 LMBR1LQ6UX01 489 aa13.17□□□□□ -0.3
MRPS28-208ENST00000521605 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
MRPS28-208ENST00000521605 COA7Q96BR5 231 aa13.17□□□□□ -0.3
MRPS28-208ENST00000521605 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
MRPS28-208ENST00000521605 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 ABCB7O75027 752 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 CDC45O75419 566 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 PDE1AP54750 535 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 HDLBPQ00341 1268 aaKnown RBP13.16□□□□□ -0.3
MRPS28-208ENST00000521605 TRIM32Q13049 653 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 HMX1Q9NP08 348 aaPredicted RBP13.16□□□□□ -0.3
MRPS28-208ENST00000521605 RAPGEFL1Q9UHV5 662 aa13.16□□□□□ -0.3
MRPS28-208ENST00000521605 RPAP1Q9BWH6 1393 aaPredicted RBP13.16□□□□□ -0.3
MRPS28-208ENST00000521605 CXCL11O14625 94 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
MRPS28-208ENST00000521605 HMGCRP04035 888 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 ZNF697Q5TEC3 545 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 FKBP1CQ5VVH2 108 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 FASTKD5Q7L8L6 764 aaKnown RBP13.15□□□□□ -0.3
MRPS28-208ENST00000521605 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 MAFAQ8NHW3 353 aaPredicted RBP13.15□□□□□ -0.3
MRPS28-208ENST00000521605 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.3
MRPS28-208ENST00000521605 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 A0A0G2JLL6 359 aaPredicted RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 NOL9Q5SY16 702 aaKnown RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 PRRT2Q7Z6L0 340 aaPredicted RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 RHPN1Q8TCX5 695 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 SUCLG2Q96I99 432 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
MRPS28-208ENST00000521605 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
MRPS28-208ENST00000521605 PFASO15067 1338 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
MRPS28-208ENST00000521605 MX1P20591 662 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 NFIAQ12857 509 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 CASC1Q6TDU7 716 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
MRPS28-208ENST00000521605 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
MRPS28-208ENST00000521605 TRIM75PA6NK02 468 aa13.12□□□□□ -0.31
MRPS28-208ENST00000521605 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
MRPS28-208ENST00000521605 BICC1Q9H694 974 aaKnown RBP13.12□□□□□ -0.31
MRPS28-208ENST00000521605 OGDHLQ9ULD0 1010 aa13.12□□□□□ -0.31
MRPS28-208ENST00000521605 MAST3O60307 1309 aa13.12□□□□□ -0.31
MRPS28-208ENST00000521605 SEC24BO95487 1268 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 PTPRAP18433 802 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 HHIPL2Q6UWX4 724 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-208ENST00000521605 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 LBHD1Q9BQE6 289 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-208ENST00000521605 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-208ENST00000521605 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
MRPS28-208ENST00000521605 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
MRPS28-208ENST00000521605 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 TREML2Q5T2D2 321 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 CDC42EP5Q6NZY7 148 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
MRPS28-208ENST00000521605 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 TRIB2Q92519 343 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 C22orf23Q9BZE7 217 aa13.1□□□□□ -0.31
MRPS28-208ENST00000521605 SLC45A1Q9Y2W3 748 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms