RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.27□□□□□ -1.09
SKP1-208ENST00000521216 GRK4P32298 578 aa8.27□□□□□ -1.09
SKP1-208ENST00000521216 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
SKP1-208ENST00000521216 BEND4Q6ZU67 534 aa8.27□□□□□ -1.09
SKP1-208ENST00000521216 SMYD4Q8IYR2 804 aaPredicted RBP8.27□□□□□ -1.09
SKP1-208ENST00000521216 GPRASP2Q96D09 838 aa8.27□□□□□ -1.09
SKP1-208ENST00000521216 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
SKP1-208ENST00000521216 FAM95CA0A1B0GW59 222 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 FANCGO15287 622 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 NEFMP07197 916 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 GK5Q6ZS86 529 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 ISL2Q96A47 359 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 WNT10AQ9GZT5 417 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 GSX1Q9H4S2 264 aaPredicted RBP8.26□□□□□ -1.09
SKP1-208ENST00000521216 STOML1Q9UBI4 398 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 CORINQ9Y5Q5 1042 aa8.26□□□□□ -1.09
SKP1-208ENST00000521216 PGRP06401 933 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 PLCG1P19174 1290 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 ZC3H6P61129 1189 aaKnown RBP8.25□□□□□ -1.09
SKP1-208ENST00000521216 RING1Q06587 406 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 PDE4BQ07343 736 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
SKP1-208ENST00000521216 ZNF507Q8TCN5 953 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 SEMA6CQ9H3T2 930 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 ACSS3Q9H6R3 686 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 POLR3KQ9Y2Y1 108 aaPredicted RBP8.25□□□□□ -1.09
SKP1-208ENST00000521216 PCDHB14Q9Y5E9 798 aa8.25□□□□□ -1.09
SKP1-208ENST00000521216 HMX2A2RU54 273 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 MAP7Q14244 749 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 FBXW10Q5XX13 1052 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 PAOXQ6QHF9 649 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 VPS37DQ86XT2 251 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 CLEC10AQ8IUN9 316 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 LRRC3Q9BY71 257 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 PCOLCE2Q9UKZ9 415 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 EFR3BQ9Y2G0 817 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 RAXQ9Y2V3 346 aa8.24□□□□□ -1.09
SKP1-208ENST00000521216 PROCP04070 461 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 ZNF165P49910 485 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 NAALADL2Q58DX5 795 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 PRR23CQ6ZRP0 262 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 UBE3DQ7Z6J8 389 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 SLITRK4Q8IW52 837 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 GINM1Q9NU53 330 aa8.23□□□□□ -1.09
SKP1-208ENST00000521216 DYNC1LI2O43237 492 aaPredicted RBP8.22□□□□□ -1.09
SKP1-208ENST00000521216 HTR3BO95264 441 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 NTF4P34130 210 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 GJA8P48165 433 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 CLCQ05315 142 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 HID1Q8IV36 788 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 KCT2Q8NC54 265 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 FAM83CQ9BQN1 747 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 FBRSQ9HAH7 460 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 TACC3Q9Y6A5 838 aa8.22□□□□□ -1.09
SKP1-208ENST00000521216 DNAJA1P31689 397 aaKnown RBP8.21□□□□□ -1.1
SKP1-208ENST00000521216 NASPP49321 788 aaPredicted RBP8.21□□□□□ -1.1
SKP1-208ENST00000521216 CPLX3Q8WVH0 158 aa8.21□□□□□ -1.1
SKP1-208ENST00000521216 EZH1Q92800 747 aaPredicted RBP8.21□□□□□ -1.1
SKP1-208ENST00000521216 FERD3LQ96RJ6 166 aa8.21□□□□□ -1.1
SKP1-208ENST00000521216 TINF2Q9BSI4 451 aa8.21□□□□□ -1.1
SKP1-208ENST00000521216 REV1Q9UBZ9 1251 aa8.21□□□□□ -1.1
SKP1-208ENST00000521216 KLHL3Q9UH77 587 aa8.21□□□□□ -1.1
SKP1-208ENST00000521216 PPT2Q9UMR5 302 aa8.21□□□□□ -1.1
SKP1-208ENST00000521216 IGHA1P01876 353 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 CDK5R2Q13319 367 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 MLECQ14165 292 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 NKG7Q16617 165 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 CCDC81Q6ZN84 652 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 RASGRP4Q8TDF6 673 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 XAGE3Q8WTP9 111 aa8.2□□□□□ -1.1
SKP1-208ENST00000521216 FURINP09958 794 aa8.19□□□□□ -1.1
SKP1-208ENST00000521216 ARID5AQ03989 594 aa8.19□□□□□ -1.1
SKP1-208ENST00000521216 REXO1Q8N1G1 1221 aaKnown RBP8.19□□□□□ -1.1
SKP1-208ENST00000521216 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
SKP1-208ENST00000521216 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
SKP1-208ENST00000521216 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
SKP1-208ENST00000521216 DPH2Q9BQC3 489 aaPredicted RBP8.19□□□□□ -1.1
SKP1-208ENST00000521216 TJP2Q9UDY2 1190 aa8.19□□□□□ -1.1
SKP1-208ENST00000521216 UPK3BL1B0FP48 263 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 UPK3BL2E5RIL1 263 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 ARMCX6Q7L4S7 300 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 TMEM87BQ96K49 555 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 MFSD14AQ96MC6 490 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 ADAM30Q9UKF2 790 aa8.18□□□□□ -1.1
SKP1-208ENST00000521216 CHURC1-FNTBB4DL54 471 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 H2AFB1P0C5Y9 115 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 H2AFB2P0C5Z0 115 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 ATF4P18848 351 aaPredicted RBP8.17□□□□□ -1.1
SKP1-208ENST00000521216 COL9A2Q14055 689 aaPredicted RBP8.17□□□□□ -1.1
SKP1-208ENST00000521216 SLBPQ14493 270 aaKnown RBP eCLIP8.17□□□□□ -1.1
SKP1-208ENST00000521216 RSPO4Q2I0M5 234 aaPredicted RBP8.17□□□□□ -1.1
SKP1-208ENST00000521216 PRAMEF13Q5VWM6 474 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 MCATQ8IVS2 390 aaKnown RBP8.17□□□□□ -1.1
SKP1-208ENST00000521216 SEC16BQ96JE7 1060 aa8.17□□□□□ -1.1
SKP1-208ENST00000521216 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms