RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TGFBRAP1Q8WUH2 860 aa19.32■□□□□ 0.68
CLN8-205ENST00000520991 DHX36Q9H2U1 1008 aaKnown RBP19.32■□□□□ 0.68
CLN8-205ENST00000520991 PI4KBQ9UBF8 816 aa19.32■□□□□ 0.68
CLN8-205ENST00000520991 HERC5Q9UII4 1024 aaKnown RBP19.32■□□□□ 0.68
CLN8-205ENST00000520991 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
CLN8-205ENST00000520991 COG6Q9Y2V7 657 aa19.32■□□□□ 0.68
CLN8-205ENST00000520991 FLT1P17948 1338 aa19.32■□□□□ 0.68
CLN8-205ENST00000520991 HMMRO75330 724 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 CYP7A1P22680 504 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 PSMC4P43686 418 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 ZNF333Q96JL9 665 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 TMEM106CQ9BVX2 250 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 TRIM34Q9BYJ4 488 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 IL1RAPL2Q9NP60 686 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 BRCA2P51587 3418 aa19.31■□□□□ 0.68
CLN8-205ENST00000520991 FMNL1O95466 1100 aaPredicted RBP19.3■□□□□ 0.68
CLN8-205ENST00000520991 HOXD10P28358 340 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 PRMT2P55345 433 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
CLN8-205ENST00000520991 RHPN1Q8TCX5 695 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
CLN8-205ENST00000520991 SLC45A1Q9Y2W3 748 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 MYO5AQ9Y4I1 1855 aaKnown RBP19.3■□□□□ 0.68
CLN8-205ENST00000520991 NDUFB9Q9Y6M9 179 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 PDE4DIPQ5VU43 2346 aa19.3■□□□□ 0.68
CLN8-205ENST00000520991 APBB1O00213 710 aa19.29■□□□□ 0.68
CLN8-205ENST00000520991 CAP2P40123 477 aa19.29■□□□□ 0.68
CLN8-205ENST00000520991 CRACR2BQ8N4Y2 399 aaPredicted RBP19.29■□□□□ 0.68
CLN8-205ENST00000520991 MAGEB6Q8N7X4 407 aa19.29■□□□□ 0.68
CLN8-205ENST00000520991 SMCR8Q8TEV9 937 aaPredicted RBP19.29■□□□□ 0.68
CLN8-205ENST00000520991 TRIM47Q96LD4 638 aa19.29■□□□□ 0.68
CLN8-205ENST00000520991 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
CLN8-205ENST00000520991 PTPRFP10586 1907 aa19.29■□□□□ 0.68
CLN8-205ENST00000520991 RBBP6Q7Z6E9 1792 aaKnown RBP19.28■□□□□ 0.68
CLN8-205ENST00000520991 MYCP01106 439 aaPredicted RBP19.28■□□□□ 0.68
CLN8-205ENST00000520991 BCRP11274 1271 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 DYNLL1P63167 89 aaKnown RBP19.28■□□□□ 0.68
CLN8-205ENST00000520991 MAP3K12Q12852 859 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 SLC4A8Q2Y0W8 1093 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 CERS3Q8IU89 383 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
CLN8-205ENST00000520991 MIGA1Q8NAN2 632 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 ZNF280CQ8ND82 737 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 BCL11AQ9H165 835 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 ZBTB40Q9NUA8 1239 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 SRRDQ9UH36 339 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 AGTPBP1Q9UPW5 1226 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 ATAD5Q96QE3 1844 aa19.28■□□□□ 0.68
CLN8-205ENST00000520991 MKI67P46013 3256 aaKnown RBP19.28■□□□□ 0.68
CLN8-205ENST00000520991 USP17L5A8MUK1 530 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 HLA-DOAP06340 250 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 CTGFP29279 349 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 FCGRTP55899 365 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 SPP2Q13103 211 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 ANTXR1Q9H6X2 564 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 SAP30BPQ9UHR5 308 aaKnown RBP19.27■□□□□ 0.68
CLN8-205ENST00000520991 PALD1Q9ULE6 856 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 FOCADQ5VW36 1801 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 MYPNQ86TC9 1320 aa19.27■□□□□ 0.68
CLN8-205ENST00000520991 IFIT2P09913 472 aaKnown RBP19.26■□□□□ 0.67
CLN8-205ENST00000520991 OSBPP22059 807 aa19.26■□□□□ 0.67
CLN8-205ENST00000520991 RRP1BQ14684 758 aaKnown RBP19.26■□□□□ 0.67
CLN8-205ENST00000520991 PRPF38BQ5VTL8 546 aaKnown RBP19.26■□□□□ 0.67
CLN8-205ENST00000520991 PROCA1Q8NCQ7 364 aaPredicted RBP19.26■□□□□ 0.67
CLN8-205ENST00000520991 RAET1EQ8TD07 263 aa19.26■□□□□ 0.67
CLN8-205ENST00000520991 AS3MTQ9HBK9 375 aa19.26■□□□□ 0.67
CLN8-205ENST00000520991 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
CLN8-205ENST00000520991 EN2P19622 333 aaPredicted RBP19.25■□□□□ 0.67
CLN8-205ENST00000520991 USP5P45974 858 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 TTF1Q15361 905 aaPredicted RBP19.25■□□□□ 0.67
CLN8-205ENST00000520991 TREML2Q5T2D2 321 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 TMED8Q6PL24 325 aaPredicted RBP19.25■□□□□ 0.67
CLN8-205ENST00000520991 FOXP4Q8IVH2 680 aaPredicted RBP19.25■□□□□ 0.67
CLN8-205ENST00000520991 SIPA1L1O43166 1804 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 RAB11FIP3O75154 756 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 ASNSP08243 561 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 HMGCS2P54868 508 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 PABPC4Q13310 644 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLN8-205ENST00000520991 SIRT2Q8IXJ6 389 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 DNAJC18Q9H819 358 aa19.25■□□□□ 0.67
CLN8-205ENST00000520991 LOC285556D6RIA3 1793 aa19.24■□□□□ 0.67
CLN8-205ENST00000520991 PRKCZQ05513 592 aa19.24■□□□□ 0.67
CLN8-205ENST00000520991 METTL16Q86W50 562 aaKnown RBP19.24■□□□□ 0.67
CLN8-205ENST00000520991 DNAJC2Q99543 621 aaKnown RBP19.24■□□□□ 0.67
CLN8-205ENST00000520991 KIAA0100Q14667 2235 aaKnown RBP19.23■□□□□ 0.67
CLN8-205ENST00000520991 GRK4P32298 578 aa19.23■□□□□ 0.67
CLN8-205ENST00000520991 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
CLN8-205ENST00000520991 MGAMO43451 1857 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 TNPO2O14787 897 aaKnown RBP19.22■□□□□ 0.67
CLN8-205ENST00000520991 GDF11O95390 407 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 MTMR2Q13614 643 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 PDE3AQ14432 1141 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 C20orf194Q5TEA3 1177 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLN8-205ENST00000520991 WDR18Q9BV38 432 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 GINM1Q9NU53 330 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms