RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 ERVK-24P63145 666 aa5.48□□□□□ -1.53
TRAPPC13-212ENST00000520525 HNRNPUQ00839 825 aaKnown RBP eCLIP5.48□□□□□ -1.53
TRAPPC13-212ENST00000520525 C12orf49Q9H741 205 aa5.48□□□□□ -1.53
TRAPPC13-212ENST00000520525 CBX8Q9HC52 389 aa5.48□□□□□ -1.53
TRAPPC13-212ENST00000520525 PARP2Q9UGN5 583 aa5.48□□□□□ -1.53
TRAPPC13-212ENST00000520525 GIPC1O14908 333 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 CELA3AP09093 270 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 PKN1Q16512 942 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 CYP27C1Q4G0S4 372 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 UBE3DQ7Z6J8 389 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 RNF214Q8ND24 703 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 TMEM40Q8WWA1 233 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 DUSP23Q9BVJ7 150 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 CEP44Q9C0F1 390 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 SPG7Q9UQ90 795 aa5.47□□□□□ -1.53
TRAPPC13-212ENST00000520525 TRIM37O94972 964 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 USP17L7P0C7H9 530 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 GNA15P30679 374 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 DAB2P98082 770 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 XPCQ01831 940 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 RING1Q06587 406 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 BNIP3Q12983 259 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 PPM1JQ5JR12 505 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 LCE5AQ5TCM9 118 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 KSR1Q8IVT5 923 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 STK11IPQ8N1F8 1099 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 FAM181AQ8N9Y4 354 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 FAM168AQ92567 244 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 ACSBG1Q96GR2 724 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 FRMD6Q96NE9 622 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 FAM8A1Q9UBU6 413 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 PCOLCE2Q9UKZ9 415 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 CSADQ9Y600 493 aa5.46□□□□□ -1.54
TRAPPC13-212ENST00000520525 PSMD2Q13200 908 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 PCNX4Q63HM2 1172 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 LLGL2Q6P1M3 1020 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 TMC4Q7Z404 712 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 CILP2Q8IUL8 1156 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 PLD6Q8N2A8 252 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 ZNF428Q96B54 188 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 FAM161BQ96MY7 647 aa5.45□□□□□ -1.54
TRAPPC13-212ENST00000520525 UNCXA6NJT0 531 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 DCDC2CA8MYV0 355 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 RNASE1P07998 156 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 ZNF865P0CJ78 1059 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 FUT4P22083 530 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 PTPN11Q06124 597 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 MESP2Q0VG99 397 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 TOP6BLQ8N6T0 577 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 MBNL3Q9NUK0 354 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 SAMM50Q9Y512 469 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 AK5Q9Y6K8 562 aa5.44□□□□□ -1.54
TRAPPC13-212ENST00000520525 OXCT1P55809 520 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 ZBTB37Q5TC79 503 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 SCARA3Q6AZY7 606 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 FAM214BQ7L5A3 538 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 C12orf40Q86WS4 652 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 NETO1Q8TDF5 533 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 GAL3ST3Q96A11 431 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 MISP3Q96FF7 219 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 RC3H2Q9HBD1 1191 aaKnown RBP5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 ADAMTS6Q9UKP5 1117 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 PCDHA4Q9UN74 947 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 CYP8B1Q9UNU6 501 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 PLAGL2Q9UPG8 496 aa5.43□□□□□ -1.54
TRAPPC13-212ENST00000520525 FANCGO15287 622 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 SORBS3O60504 671 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 CEACAM5P06731 702 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 CD8BP10966 210 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 EIF4BP23588 611 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 CD96P40200 585 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 MRPL58Q14197 206 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 LRRC14Q15048 493 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 SV2BQ7L1I2 683 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 MRRFQ96E11 262 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 HEXIM2Q96MH2 286 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 SLC38A3Q99624 504 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 BCL11AQ9H165 835 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 MRS2Q9HD23 443 aa5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 SSU72Q9NP77 194 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 TTF2Q9UNY4 1162 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-212ENST00000520525 VAMP1P23763 118 aa5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 ITGAEP38570 1179 aa5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 INPP5AQ14642 412 aa5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 IFI16Q16666 785 aaKnown RBP5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 LRFN4Q6PJG9 635 aa5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 BHLHE22Q8NFJ8 381 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 FAM84AQ96KN4 292 aa5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 KIAA1522Q9P206 1035 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 VTI1BQ9UEU0 232 aa5.41□□□□□ -1.54
TRAPPC13-212ENST00000520525 CTSHP09668 335 aa5.4□□□□□ -1.54
TRAPPC13-212ENST00000520525 CDK8P49336 464 aa5.4□□□□□ -1.54
TRAPPC13-212ENST00000520525 PRKCQQ04759 706 aa5.4□□□□□ -1.54
TRAPPC13-212ENST00000520525 TTBK2Q6IQ55 1244 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms