RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PDE3AQ14432 1141 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 NUTM2GQ5VZR2 741 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 CCDC84Q86UT8 332 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 LRRC56Q8IYG6 542 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 SMG8Q8ND04 991 aaKnown RBP5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 STK35Q8TDR2 534 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 KCNB2Q92953 911 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 TMEM74Q96NL1 305 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 CYP4F12Q9HCS2 524 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 CACNA2D2Q9NY47 1150 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 GGT7Q9UJ14 662 aa5.45□□□□□ -1.54
HMGB1P41-201ENST00000520234 SLFN14P0C7P3 912 aa5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 TCF3P15923 654 aa5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 MAP3K11Q16584 847 aa5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 ZNF792Q3KQV3 632 aa5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 MAP1SQ66K74 1059 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 PHC3Q8NDX5 983 aa5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 CCDC86Q9H6F5 360 aaKnown RBP5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 RAD18Q9NS91 495 aa5.44□□□□□ -1.54
HMGB1P41-201ENST00000520234 AOC2O75106 756 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 ECEL1O95672 775 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 TSPAN15O95858 294 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 DLGAP3O95886 979 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 CTSBP07858 339 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 ZSCAN22P10073 491 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 MAP4P27816 1152 aaKnown RBP5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 GBP2P32456 591 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 LMNB2Q03252 620 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 PLCL1Q15111 1095 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 KIF4BQ2VIQ3 1234 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 FDX2Q6P4F2 183 aa5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 NPM2Q86SE8 214 aaKnown RBP5.43□□□□□ -1.54
HMGB1P41-201ENST00000520234 ZNF862O60290 1169 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 HDLBPQ00341 1268 aaKnown RBP5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 RASIP1Q5U651 963 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 METTL16Q86W50 562 aaKnown RBP5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 GRIN3AQ8TCU5 1115 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 ACSBG1Q96GR2 724 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 RHOVQ96L33 236 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 ZC3H12CQ9C0D7 883 aaKnown RBP5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 MIR1-1HGQ9H1L0 117 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 KBTBD4Q9NVX7 518 aa5.42□□□□□ -1.54
HMGB1P41-201ENST00000520234 GAS2O43903 313 aaKnown RBP5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 TIAF1O95411 115 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 LIG1P18858 919 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 TFE3P19532 575 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 SOX4Q06945 474 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 CAMK2GQ13555 558 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 DBX2Q6ZNG2 339 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 USP48Q86UV5 1035 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 NT5DC4Q86YG4 428 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 ZNF654Q8IZM8 581 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 C12orf50Q8NA57 414 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 GPBAR1Q8TDU6 330 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 PPP1R16BQ96T49 567 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 WDR18Q9BV38 432 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 COPRSQ9NQ92 184 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 KCNQ5Q9NR82 932 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 IGSF5Q9NSI5 407 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 TLR6Q9Y2C9 796 aa5.41□□□□□ -1.54
HMGB1P41-201ENST00000520234 MINDY4BA8MYZ0 360 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 PF4P02776 101 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 ADH5P11766 374 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 EIF4A3P38919 411 aaKnown RBP5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 CTSWP56202 376 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 ID3Q02535 119 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 AKAP4Q5JQC9 854 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 WDR89Q96FK6 387 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 DDX41Q9UJV9 622 aaKnown RBP5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 SUPT16HQ9Y5B9 1047 aaKnown RBP5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 SNCAIPQ9Y6H5 919 aa5.4□□□□□ -1.54
HMGB1P41-201ENST00000520234 ROBO2Q9HCK4 1378 aa5.4□□□□□ -1.55
HMGB1P41-201ENST00000520234 ERVK-24P63145 666 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 SGO2Q562F6 1265 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 ZC3H12AQ5D1E8 599 aaKnown RBP5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 SNAP47Q5SQN1 464 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 MPRIPQ6WCQ1 1025 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 GAL3ST3Q96A11 431 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 TGIF2Q9GZN2 237 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 ATXN3LQ9H3M9 355 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 CRIM1Q9NZV1 1036 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 PCDHA4Q9UN74 947 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 SLC5A6Q9Y289 635 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 PCDHB5Q9Y5E4 795 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 PCDHGC5Q9Y5F6 944 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 TACC3Q9Y6A5 838 aa5.39□□□□□ -1.55
HMGB1P41-201ENST00000520234 LRRC10BA6NIK2 292 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 GREM1O60565 184 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 RXRBP28702 533 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 SEPT6Q14141 434 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 C9orf131Q5VYM1 1079 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 FAM196AQ6ZSG2 479 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 HDXQ7Z353 690 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 ANKLE2Q86XL3 938 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 KIAA0825Q8IV33 1275 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 STK11IPQ8N1F8 1099 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 GOLM1Q8NBJ4 401 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 C2CD4AQ8NCU7 369 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms