RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
PABPC1-214ENST00000520142 IRF6O14896 467 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 CTNND1O60716 968 aaKnown RBP13.46□□□□□ -0.25
PABPC1-214ENST00000520142 MOGSQ13724 837 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 SCYL3Q8IZE3 742 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 OTUD5Q96G74 571 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
PABPC1-214ENST00000520142 PI4KBQ9UBF8 816 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
PABPC1-214ENST00000520142 KCNH4Q9UQ05 1017 aa13.46□□□□□ -0.25
PABPC1-214ENST00000520142 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 MAGEB6P1A0A0J9YX57 407 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 MX1P20591 662 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 GTF2A2P52657 109 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 FOXP4Q8IVH2 680 aaPredicted RBP13.45□□□□□ -0.26
PABPC1-214ENST00000520142 LCORLQ8N3X6 602 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 R3HDMLQ9H3Y0 253 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 PALD1Q9ULE6 856 aa13.45□□□□□ -0.26
PABPC1-214ENST00000520142 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
PABPC1-214ENST00000520142 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 PTPRAP18433 802 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.26
PABPC1-214ENST00000520142 EHD4Q9H223 541 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.44□□□□□ -0.26
PABPC1-214ENST00000520142 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
PABPC1-214ENST00000520142 MYH7P12883 1935 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 DOCK1Q14185 1865 aa13.44□□□□□ -0.26
PABPC1-214ENST00000520142 CCL15-CCL14A0A0B4J2E2 113 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 CAP2P40123 477 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 PDE1AP54750 535 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 JAG1P78504 1218 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 NUCB1Q02818 461 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 CCL15Q16663 113 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 TATDN1Q6P1N9 297 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 PUS7LQ9H0K6 701 aaKnown RBP13.43□□□□□ -0.26
PABPC1-214ENST00000520142 ARMT1Q9H993 441 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
PABPC1-214ENST00000520142 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
PABPC1-214ENST00000520142 CXCL11O14625 94 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 ERC2O15083 957 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 PRKAB2O43741 272 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 CETPP11597 493 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 USP5P45974 858 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 GABPAQ06546 454 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 SNAPC2Q13487 334 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 CRNKL1Q9BZJ0 848 aaKnown RBP13.42□□□□□ -0.26
PABPC1-214ENST00000520142 ZCCHC17Q9NP64 241 aaKnown RBP13.42□□□□□ -0.26
PABPC1-214ENST00000520142 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.42□□□□□ -0.26
PABPC1-214ENST00000520142 SAP30BPQ9UHR5 308 aaKnown RBP13.42□□□□□ -0.26
PABPC1-214ENST00000520142 MYH1P12882 1939 aa13.42□□□□□ -0.26
PABPC1-214ENST00000520142 BTBD19C9JJ37 291 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 GPR25O00155 361 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
PABPC1-214ENST00000520142 MBD4O95243 580 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 PLCD1P51178 756 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 EVX2Q03828 476 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 CHD1LQ86WJ1 897 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 ZNF296Q8WUU4 475 aaPredicted RBP13.41□□□□□ -0.26
PABPC1-214ENST00000520142 OSBP2Q969R2 916 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 LNPKQ9C0E8 428 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 ZHX2Q9Y6X8 837 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 CASP8AP2Q9UKL3 1982 aa13.41□□□□□ -0.26
PABPC1-214ENST00000520142 A0A0G2JLL6 359 aaPredicted RBP13.4□□□□□ -0.26
PABPC1-214ENST00000520142 ZFYP08048 801 aaPredicted RBP13.4□□□□□ -0.26
PABPC1-214ENST00000520142 CRHR2Q13324 411 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 PRRT2Q7Z6L0 340 aaPredicted RBP13.4□□□□□ -0.26
PABPC1-214ENST00000520142 ANKRD23Q86SG2 305 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 TTC6Q86TZ1 520 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 CCDC84Q86UT8 332 aaPredicted RBP13.4□□□□□ -0.26
PABPC1-214ENST00000520142 APPBP2Q92624 585 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 STRBPQ96SI9 672 aaKnown RBP13.4□□□□□ -0.26
PABPC1-214ENST00000520142 PICK1Q9NRD5 415 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 SERPINB13Q9UIV8 391 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 NAV1Q8NEY1 1877 aa13.4□□□□□ -0.26
PABPC1-214ENST00000520142 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 PTPRFP10586 1907 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 HLA-DOAP06340 250 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 SHMT1P34896 483 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
PABPC1-214ENST00000520142 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 PLEKHM2Q8IWE5 1019 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
PABPC1-214ENST00000520142 MCM9Q9NXL9 1143 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms