RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 XBP1P17861 261 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 IL6STP40189 918 aaPredicted RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 ARMT1Q9H993 441 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 NID2Q14112 1375 aa13.01□□□□□ -0.33
NUDCD1-203ENST00000519607 MYH6P13533 1939 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 BTBD18B2RXH4 712 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 ARHGAP6O43182 974 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 POSTNQ15063 836 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
NUDCD1-203ENST00000519607 SMARCE1Q969G3 411 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 EPB41L4AQ9HCS5 686 aaPredicted RBP13□□□□□ -0.33
NUDCD1-203ENST00000519607 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13□□□□□ -0.334e-7■■□□□ 12.3
NUDCD1-203ENST00000519607 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 PNPLA7Q6ZV29 1317 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 PTPREP23469 700 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 AKAP17AQ02040 695 aaKnown RBP13□□□□□ -0.33
NUDCD1-203ENST00000519607 RASGRF1Q13972 1273 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
NUDCD1-203ENST00000519607 TMX1Q9H3N1 280 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 DNAI1Q9UI46 699 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
NUDCD1-203ENST00000519607 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 ZNF34Q8IZ26 560 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 UBAC1Q9BSL1 405 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 ARGLU1Q9NWB6 273 aaPredicted RBP12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 TIAM2Q8IVF5 1701 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 POLR2DO15514 142 aaKnown RBP12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 TPM1P09493 284 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 CRACR2BQ8N4Y2 399 aaPredicted RBP12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 MNS1Q8NEH6 495 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 UBXN4Q92575 508 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 DPF2Q92785 391 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 INCENPQ9NQS7 918 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 LRP2BPQ9P2M1 347 aa12.99□□□□□ -0.33
NUDCD1-203ENST00000519607 BCL9O00512 1426 aa12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 FANCBQ8NB91 859 aa12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 ENOX1Q8TC92 643 aaKnown RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 FBXO2Q9UK22 296 aaPredicted RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
NUDCD1-203ENST00000519607 NPHP1O15259 732 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 STX10O60499 249 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 TOB1P50616 345 aaPredicted RBP12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 ERCC6LQ2NKX8 1250 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 CCDC152Q4G0S7 254 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 CT47A1Q5JQC4 288 aaPredicted RBP12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 PDILTQ8N807 584 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 RTL9Q8NET4 1388 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 SPECC1Q5M775 1068 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 SPECC1LQ69YQ0 1117 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 ZNF771Q7L3S4 317 aaPredicted RBP12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 ESR2Q92731 530 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 ZKSCAN3Q9BRR0 538 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 LRP5O75197 1615 aa12.97□□□□□ -0.33
NUDCD1-203ENST00000519607 URI1O94763 535 aaPredicted RBP12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 ERCC5P28715 1186 aaPredicted RBP12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 GUCY1A2P33402 732 aa12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 ZNF654Q8IZM8 581 aa12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 LCORLQ8N3X6 602 aa12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 CCDC82Q8N4S0 544 aa12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 RNF26Q9BY78 433 aaPredicted RBP12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 BTG4Q9NY30 223 aa12.96□□□□□ -0.33
NUDCD1-203ENST00000519607 EXOC5O00471 708 aa12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 BMP15O95972 392 aa12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 SARSP49591 514 aaKnown RBP12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 PPARAQ07869 468 aa12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 MORC3Q14149 939 aa12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 PARP10Q53GL7 1025 aa12.96□□□□□ -0.34
NUDCD1-203ENST00000519607 SLC4A9Q96Q91 983 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms